Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | MARGE09_RS01510 | Genome accession | NZ_AP023086 |
| Coordinates | 416036..416470 (+) | Length | 144 a.a. |
| NCBI ID | WP_236985603.1 | Uniprot ID | A0AAN1WEG5 |
| Organism | Marinagarivorans cellulosilyticus strain GE09 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 411036..421470
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MARGE09_RS01490 (MARGE09_P0291) | pilD | 411329..412216 (-) | 888 | WP_236985599.1 | prepilin peptidase | Machinery gene |
| MARGE09_RS01495 (MARGE09_P0292) | pilC | 412216..413433 (-) | 1218 | WP_236985600.1 | type II secretion system F family protein | Machinery gene |
| MARGE09_RS01500 (MARGE09_P0293) | pilB | 413437..415140 (-) | 1704 | WP_236985601.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| MARGE09_RS01505 (MARGE09_P0294) | - | 415388..415711 (-) | 324 | WP_236985602.1 | ComEA family DNA-binding protein | - |
| MARGE09_RS01510 (MARGE09_P0295) | pilA2 | 416036..416470 (+) | 435 | WP_236985603.1 | pilin | Machinery gene |
| MARGE09_RS01515 (MARGE09_P0296) | - | 416514..418397 (+) | 1884 | WP_236985604.1 | O-antigen ligase family protein | - |
| MARGE09_RS01520 | - | 418599..418820 (-) | 222 | WP_236985605.1 | hypothetical protein | - |
| MARGE09_RS01525 (MARGE09_P0297) | - | 419023..419577 (-) | 555 | WP_236985606.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14363.37 Da Isoelectric Point: 9.1616
>NTDB_id=81238 MARGE09_RS01510 WP_236985603.1 416036..416470(+) (pilA2) [Marinagarivorans cellulosilyticus strain GE09]
MKKVQQGFTLIELMIVVAIIGILAAVALPAYQDYTIRARVTEGIGFAAAAKVTVAENAAAGASSLAAGWTAPTATASVTS
VAINSSTGAITITFGSAVSANATMIFTPTASGTALTAGTPASNSLSWTCTGGNLSSNYRPSNCR
MKKVQQGFTLIELMIVVAIIGILAAVALPAYQDYTIRARVTEGIGFAAAAKVTVAENAAAGASSLAAGWTAPTATASVTS
VAINSSTGAITITFGSAVSANATMIFTPTASGTALTAGTPASNSLSWTCTGGNLSSNYRPSNCR
Nucleotide
Download Length: 435 bp
>NTDB_id=81238 MARGE09_RS01510 WP_236985603.1 416036..416470(+) (pilA2) [Marinagarivorans cellulosilyticus strain GE09]
ATGAAGAAAGTACAACAAGGTTTTACCCTAATCGAATTAATGATCGTTGTGGCTATTATCGGTATTTTGGCTGCAGTCGC
TTTGCCCGCCTATCAAGATTATACAATTAGGGCGAGAGTAACCGAAGGTATTGGCTTTGCTGCGGCAGCAAAAGTAACTG
TTGCCGAGAACGCCGCCGCAGGGGCATCGTCTTTAGCTGCTGGGTGGACTGCTCCTACGGCGACAGCAAGTGTTACTAGT
GTTGCAATTAACTCGTCAACCGGCGCAATTACAATAACCTTCGGCTCCGCAGTCAGTGCTAATGCAACGATGATATTTAC
TCCAACGGCATCCGGGACTGCCTTGACTGCTGGCACGCCCGCGTCTAACTCTCTTTCATGGACGTGCACTGGTGGAAACT
TGAGTTCAAATTACAGACCATCAAACTGTCGCTAA
ATGAAGAAAGTACAACAAGGTTTTACCCTAATCGAATTAATGATCGTTGTGGCTATTATCGGTATTTTGGCTGCAGTCGC
TTTGCCCGCCTATCAAGATTATACAATTAGGGCGAGAGTAACCGAAGGTATTGGCTTTGCTGCGGCAGCAAAAGTAACTG
TTGCCGAGAACGCCGCCGCAGGGGCATCGTCTTTAGCTGCTGGGTGGACTGCTCCTACGGCGACAGCAAGTGTTACTAGT
GTTGCAATTAACTCGTCAACCGGCGCAATTACAATAACCTTCGGCTCCGCAGTCAGTGCTAATGCAACGATGATATTTAC
TCCAACGGCATCCGGGACTGCCTTGACTGCTGGCACGCCCGCGTCTAACTCTCTTTCATGGACGTGCACTGGTGGAAACT
TGAGTTCAAATTACAGACCATCAAACTGTCGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
53.472 |
100 |
0.535 |
| pilA2 | Legionella pneumophila str. Paris |
52.778 |
100 |
0.528 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
46.584 |
100 |
0.521 |
| pilA/pilA1 | Eikenella corrodens VA1 |
40.361 |
100 |
0.465 |
| comP | Acinetobacter baylyi ADP1 |
41.667 |
100 |
0.451 |
| pilE | Neisseria gonorrhoeae MS11 |
34.884 |
100 |
0.417 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.107 |
100 |
0.41 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38.667 |
100 |
0.403 |
| pilA | Pseudomonas aeruginosa PAK |
34.615 |
100 |
0.375 |
| pilA | Haemophilus influenzae 86-028NP |
36.486 |
100 |
0.375 |
| pilA | Acinetobacter baumannii strain A118 |
35.374 |
100 |
0.361 |