Detailed information NTG0705191

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: NLY76_RS00750
• Genome accession: NZ_CP100430
• Coordinates: 122248..122529 (+)
• Length: 93 a.a.
• NCBI ID: WP_044770158.1
• Uniprot ID: -
• Organism: Streptococcus suis strain LSS42
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 117248..127529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLY76_RS00730 (NLY76_00730)	-	118911..119276 (+)	366	WP_024386552.1	DUF1033 family protein	-
NLY76_RS00735 (NLY76_00735)	-	119311..120261 (-)	951	WP_044770155.1	S66 peptidase family protein	-
NLY76_RS00740 (NLY76_00740)	comYA	120347..121297 (+)	951	WP_044770156.1	competence type IV pilus ATPase ComGA	Machinery gene
NLY76_RS00745 (NLY76_00745)	comYB	121209..122246 (+)	1038	WP_044770157.1	competence type IV pilus assembly protein ComGB	Machinery gene
NLY76_RS00750 (NLY76_00750)	comYC	122248..122529 (+)	282	WP_044770158.1	competence type IV pilus major pilin ComGC	Machinery gene
NLY76_RS00755 (NLY76_00755)	comGD	122510..122917 (+)	408	WP_044770160.1	competence type IV pilus minor pilin ComGD	-
NLY76_RS00760 (NLY76_00760)	comYE	122889..123182 (+)	294	WP_024401507.1	competence type IV pilus minor pilin ComGE	Machinery gene
NLY76_RS00765 (NLY76_00765)	comGF/cglF	123169..123603 (+)	435	WP_052833555.1	competence type IV pilus minor pilin ComGF	Machinery gene
NLY76_RS00770 (NLY76_00770)	comGG	123581..123991 (+)	411	WP_009909099.1	competence type IV pilus minor pilin ComGG	-
NLY76_RS00775 (NLY76_00775)	comYH	124048..125001 (+)	954	WP_014637318.1	class I SAM-dependent methyltransferase	Machinery gene
NLY76_RS00780 (NLY76_00780)	-	125051..126238 (+)	1188	WP_014637319.1	acetate kinase	-
NLY76_RS00785 (NLY76_00785)	-	126553..127104 (+)	552	WP_044674513.1	folate family ECF transporter S component	-

Sequence

Protein

• Length: 93 a.a.
• Molecular weight: 10466.29 Da
• Isoelectric Point: 4.8481

>NTDB_id=705191 NLY76_RS00750 WP_044770158.1 122248..122529(+) (comYC) [Streptococcus suis strain LSS42]
MKKLIEMKVKGFTLVEMLVVLGIISLLLLLFVPNLSQQKDAVQEKGNAAVVKVVESQMELYELEHDEEATVEDLQQAGYI
TEKQAKQYATAKK

Nucleotide

• Length: 282 bp

>NTDB_id=705191 NLY76_RS00750 WP_044770158.1 122248..122529(+) (comYC) [Streptococcus suis strain LSS42]
ATGAAAAAATTAATTGAAATGAAGGTAAAAGGGTTCACTCTGGTGGAAATGTTAGTCGTTTTGGGGATCATTAGCCTGCT
CTTGCTCCTTTTTGTGCCAAATTTGAGCCAGCAGAAGGATGCTGTTCAAGAGAAAGGAAATGCTGCGGTTGTCAAAGTAG
TAGAGAGCCAGATGGAGCTCTATGAATTGGAACATGACGAGGAAGCAACGGTGGAGGATTTGCAACAGGCAGGTTATATT
ACTGAAAAACAAGCAAAACAGTATGCTACGGCGAAAAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus suis isolate S10	92.473	100	0.925
comGC/cglC	Streptococcus pneumoniae TIGR4	65.217	98.925	0.645
comGC/cglC	Streptococcus pneumoniae Rx1	65.217	98.925	0.645
comGC/cglC	Streptococcus pneumoniae D39	65.217	98.925	0.645
comGC/cglC	Streptococcus pneumoniae R6	65.217	98.925	0.645
comGC/cglC	Streptococcus mitis NCTC 12261	65.217	98.925	0.645
comGC/cglC	Streptococcus mitis SK321	65.217	98.925	0.645
comYC	Streptococcus gordonii str. Challis substr. CH1	64.045	95.699	0.613
comYC	Streptococcus mutans UA140	60.227	94.624	0.57
comYC	Streptococcus mutans UA159	60.227	94.624	0.57
comGC	Lactococcus lactis subsp. cremoris KW2	57.955	94.624	0.548
comGC	Staphylococcus aureus MW2	48.718	83.871	0.409
comGC	Staphylococcus aureus N315	48.718	83.871	0.409
comGC	Bacillus subtilis subsp. subtilis str. 168	45.333	80.645	0.366