Detailed information NTG0705193

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: NLY76_RS00765
• Genome accession: NZ_CP100430
• Coordinates: 123169..123603 (+)
• Length: 144 a.a.
• NCBI ID: WP_052833555.1
• Uniprot ID: -
• Organism: Streptococcus suis strain LSS42
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 118169..128603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLY76_RS00730 (NLY76_00730)	-	118911..119276 (+)	366	WP_024386552.1	DUF1033 family protein	-
NLY76_RS00735 (NLY76_00735)	-	119311..120261 (-)	951	WP_044770155.1	S66 peptidase family protein	-
NLY76_RS00740 (NLY76_00740)	comYA	120347..121297 (+)	951	WP_044770156.1	competence type IV pilus ATPase ComGA	Machinery gene
NLY76_RS00745 (NLY76_00745)	comYB	121209..122246 (+)	1038	WP_044770157.1	competence type IV pilus assembly protein ComGB	Machinery gene
NLY76_RS00750 (NLY76_00750)	comYC	122248..122529 (+)	282	WP_044770158.1	competence type IV pilus major pilin ComGC	Machinery gene
NLY76_RS00755 (NLY76_00755)	comGD	122510..122917 (+)	408	WP_044770160.1	competence type IV pilus minor pilin ComGD	-
NLY76_RS00760 (NLY76_00760)	comYE	122889..123182 (+)	294	WP_024401507.1	competence type IV pilus minor pilin ComGE	Machinery gene
NLY76_RS00765 (NLY76_00765)	comGF/cglF	123169..123603 (+)	435	WP_052833555.1	competence type IV pilus minor pilin ComGF	Machinery gene
NLY76_RS00770 (NLY76_00770)	comGG	123581..123991 (+)	411	WP_009909099.1	competence type IV pilus minor pilin ComGG	-
NLY76_RS00775 (NLY76_00775)	comYH	124048..125001 (+)	954	WP_014637318.1	class I SAM-dependent methyltransferase	Machinery gene
NLY76_RS00780 (NLY76_00780)	-	125051..126238 (+)	1188	WP_014637319.1	acetate kinase	-
NLY76_RS00785 (NLY76_00785)	-	126553..127104 (+)	552	WP_044674513.1	folate family ECF transporter S component	-
NLY76_RS00790 (NLY76_00790)	-	127160..128416 (+)	1257	WP_044770162.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16435.78 Da
• Isoelectric Point: 7.9737

>NTDB_id=705193 NLY76_RS00765 WP_052833555.1 123169..123603(+) (comGF/cglF) [Streptococcus suis strain LSS42]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQSELVKVENGKVYVNKDG
QALAFGKSRSDDFRKTNDRGQGYQPMIYQVDSAAISQEKQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=705193 NLY76_RS00765 WP_052833555.1 123169..123603(+) (comGF/cglF) [Streptococcus suis strain LSS42]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTATCAGGAAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCACATTACCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTTT
CTAGCCAGTTGCGGTCGGAATGGGACCAGTCGGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAATAAGGATGGA
CAAGCATTAGCCTTTGGCAAGTCACGTTCGGATGATTTTCGGAAAACAAATGACAGAGGACAGGGCTATCAGCCCATGAT
TTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAAACAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae Rx1	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae D39	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae R6	54.61	97.917	0.535
comGF/cglF	Streptococcus mitis NCTC 12261	55.224	93.056	0.514
comYF	Streptococcus mutans UA140	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	52.239	93.056	0.486
comYF	Streptococcus mutans UA159	48.611	100	0.486
comGF	Lactococcus lactis subsp. cremoris KW2	46.099	97.917	0.451