Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | NLY76_RS00775 | Genome accession | NZ_CP100430 |
| Coordinates | 124048..125001 (+) | Length | 317 a.a. |
| NCBI ID | WP_014637318.1 | Uniprot ID | G7SD66 |
| Organism | Streptococcus suis strain LSS42 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 119048..130001
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLY76_RS00735 (NLY76_00735) | - | 119311..120261 (-) | 951 | WP_044770155.1 | S66 peptidase family protein | - |
| NLY76_RS00740 (NLY76_00740) | comYA | 120347..121297 (+) | 951 | WP_044770156.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NLY76_RS00745 (NLY76_00745) | comYB | 121209..122246 (+) | 1038 | WP_044770157.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NLY76_RS00750 (NLY76_00750) | comYC | 122248..122529 (+) | 282 | WP_044770158.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NLY76_RS00755 (NLY76_00755) | comGD | 122510..122917 (+) | 408 | WP_044770160.1 | competence type IV pilus minor pilin ComGD | - |
| NLY76_RS00760 (NLY76_00760) | comYE | 122889..123182 (+) | 294 | WP_024401507.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| NLY76_RS00765 (NLY76_00765) | comGF/cglF | 123169..123603 (+) | 435 | WP_052833555.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NLY76_RS00770 (NLY76_00770) | comGG | 123581..123991 (+) | 411 | WP_009909099.1 | competence type IV pilus minor pilin ComGG | - |
| NLY76_RS00775 (NLY76_00775) | comYH | 124048..125001 (+) | 954 | WP_014637318.1 | class I SAM-dependent methyltransferase | Machinery gene |
| NLY76_RS00780 (NLY76_00780) | - | 125051..126238 (+) | 1188 | WP_014637319.1 | acetate kinase | - |
| NLY76_RS00785 (NLY76_00785) | - | 126553..127104 (+) | 552 | WP_044674513.1 | folate family ECF transporter S component | - |
| NLY76_RS00790 (NLY76_00790) | - | 127160..128416 (+) | 1257 | WP_044770162.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| NLY76_RS00795 (NLY76_00795) | pepA | 128461..129522 (-) | 1062 | WP_044770163.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35745.78 Da Isoelectric Point: 4.4003
>NTDB_id=705194 NLY76_RS00775 WP_014637318.1 124048..125001(+) (comYH) [Streptococcus suis strain LSS42]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=705194 NLY76_RS00775 WP_014637318.1 124048..125001(+) (comYH) [Streptococcus suis strain LSS42]
ATGAATTTTGAAAAGATCGAACAGGCTTATGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCGCAGACTATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTAGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCTGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTATGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCGCAGACTATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTAGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCTGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.443 |
99.685 |
0.603 |
| comYH | Streptococcus mutans UA159 |
60.127 |
99.685 |
0.599 |