Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | M5595_RS11590 | Genome accession | NZ_CP097376 |
| Coordinates | 2409650..2410699 (-) | Length | 349 a.a. |
| NCBI ID | WP_038352483.1 | Uniprot ID | A0AAC9QSY4 |
| Organism | Eubacterium limosum strain B2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2404650..2415699
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5595_RS11575 (M5595_11575) | - | 2405908..2406164 (-) | 257 | Protein_2294 | type II toxin-antitoxin system YafQ family toxin | - |
| M5595_RS11580 (M5595_11580) | - | 2406157..2406437 (-) | 281 | Protein_2295 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| M5595_RS11585 (M5595_11585) | - | 2406515..2409631 (-) | 3117 | WP_052237261.1 | EAL domain-containing protein | - |
| M5595_RS11590 (M5595_11590) | pilT | 2409650..2410699 (-) | 1050 | WP_038352483.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| M5595_RS11595 (M5595_11595) | - | 2410720..2412396 (-) | 1677 | WP_038352482.1 | GspE/PulE family protein | - |
| M5595_RS11600 (M5595_11600) | - | 2412515..2413030 (-) | 516 | WP_038352481.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| M5595_RS11605 (M5595_11605) | - | 2413032..2414885 (-) | 1854 | WP_038352480.1 | GGDEF domain-containing protein | - |
| M5595_RS11610 (M5595_11610) | - | 2415211..2415633 (+) | 423 | WP_038352479.1 | Hsp20/alpha crystallin family protein | - |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 38482.04 Da Isoelectric Point: 5.9999
>NTDB_id=689301 M5595_RS11590 WP_038352483.1 2409650..2410699(-) (pilT) [Eubacterium limosum strain B2]
MPTILDLIAYGRQTGCSDIHLTADLPPVFRSNGVLVKGPFEMSKQEIGEMIIGMLSEMNREKIKRGEDADFTFVTPEGLR
QRVNVYRQQNELCAAVRLLNDTIPTFEELGLPPIIRKLAAEPRGLILITGPTGSGKSTTLAAMIDYININFAKHIITIED
PVEYRHYHKLSMIHQREVGVDVASFADALRSSLREDPDVILVGEMRDYETISAAVTAAETGHLVLSTLHTIGAANTVDRI
IDVFPPHSQQQIRTQLASTLKGVVTQQLVPLASGEGRMAALEVMTGTDAVLNLIRENKTHQLSSAMQTGSRDGMNTLNSH
LAKLVKEGKIGFDTGLQWSSDKNEFNQYF
MPTILDLIAYGRQTGCSDIHLTADLPPVFRSNGVLVKGPFEMSKQEIGEMIIGMLSEMNREKIKRGEDADFTFVTPEGLR
QRVNVYRQQNELCAAVRLLNDTIPTFEELGLPPIIRKLAAEPRGLILITGPTGSGKSTTLAAMIDYININFAKHIITIED
PVEYRHYHKLSMIHQREVGVDVASFADALRSSLREDPDVILVGEMRDYETISAAVTAAETGHLVLSTLHTIGAANTVDRI
IDVFPPHSQQQIRTQLASTLKGVVTQQLVPLASGEGRMAALEVMTGTDAVLNLIRENKTHQLSSAMQTGSRDGMNTLNSH
LAKLVKEGKIGFDTGLQWSSDKNEFNQYF
Nucleotide
Download Length: 1050 bp
>NTDB_id=689301 M5595_RS11590 WP_038352483.1 2409650..2410699(-) (pilT) [Eubacterium limosum strain B2]
ATGCCAACCATCTTAGACCTAATAGCCTACGGCCGCCAGACGGGCTGTTCGGATATACATTTGACGGCGGATCTGCCGCC
AGTGTTCAGGAGCAACGGGGTGCTTGTCAAAGGCCCCTTTGAAATGAGCAAACAGGAAATCGGGGAGATGATCATCGGGA
TGCTCAGTGAGATGAACCGTGAGAAAATAAAGCGGGGAGAGGACGCGGATTTTACCTTTGTCACGCCGGAGGGGCTCAGA
CAGAGAGTTAACGTGTACCGCCAGCAGAATGAGCTCTGCGCTGCCGTTCGCCTGCTCAACGACACCATTCCCACCTTTGA
GGAGCTGGGTCTGCCGCCCATTATCCGCAAGCTTGCCGCTGAACCGAGAGGGCTGATCCTGATCACCGGGCCGACCGGGA
GCGGGAAGTCCACCACACTGGCAGCCATGATCGACTATATCAACATCAATTTTGCCAAGCACATTATCACCATTGAGGAC
CCGGTGGAATATCGTCATTACCATAAGCTGAGCATGATCCACCAGCGCGAGGTGGGAGTGGATGTAGCCTCCTTTGCCGA
CGCGCTGCGCTCATCCCTGCGCGAGGACCCCGACGTTATTCTGGTAGGGGAAATGCGTGACTACGAAACCATCTCAGCCG
CTGTAACCGCCGCTGAAACCGGACATCTCGTGCTGTCTACCCTGCACACCATCGGGGCTGCCAACACAGTGGACCGTATT
ATCGACGTGTTTCCGCCCCACAGCCAGCAGCAGATAAGAACACAGCTTGCCAGCACCCTGAAGGGCGTCGTGACCCAGCA
GCTTGTGCCGCTGGCCTCCGGTGAAGGCCGAATGGCAGCCCTCGAGGTGATGACAGGCACCGACGCGGTGCTCAACCTTA
TCCGTGAAAACAAAACCCATCAGCTTTCCTCAGCCATGCAGACCGGCAGCCGGGACGGTATGAACACCCTGAACAGCCAC
TTGGCCAAGCTGGTAAAAGAAGGAAAGATCGGCTTTGATACCGGCCTCCAGTGGTCGTCTGACAAAAACGAGTTTAACCA
ATACTTTTAG
ATGCCAACCATCTTAGACCTAATAGCCTACGGCCGCCAGACGGGCTGTTCGGATATACATTTGACGGCGGATCTGCCGCC
AGTGTTCAGGAGCAACGGGGTGCTTGTCAAAGGCCCCTTTGAAATGAGCAAACAGGAAATCGGGGAGATGATCATCGGGA
TGCTCAGTGAGATGAACCGTGAGAAAATAAAGCGGGGAGAGGACGCGGATTTTACCTTTGTCACGCCGGAGGGGCTCAGA
CAGAGAGTTAACGTGTACCGCCAGCAGAATGAGCTCTGCGCTGCCGTTCGCCTGCTCAACGACACCATTCCCACCTTTGA
GGAGCTGGGTCTGCCGCCCATTATCCGCAAGCTTGCCGCTGAACCGAGAGGGCTGATCCTGATCACCGGGCCGACCGGGA
GCGGGAAGTCCACCACACTGGCAGCCATGATCGACTATATCAACATCAATTTTGCCAAGCACATTATCACCATTGAGGAC
CCGGTGGAATATCGTCATTACCATAAGCTGAGCATGATCCACCAGCGCGAGGTGGGAGTGGATGTAGCCTCCTTTGCCGA
CGCGCTGCGCTCATCCCTGCGCGAGGACCCCGACGTTATTCTGGTAGGGGAAATGCGTGACTACGAAACCATCTCAGCCG
CTGTAACCGCCGCTGAAACCGGACATCTCGTGCTGTCTACCCTGCACACCATCGGGGCTGCCAACACAGTGGACCGTATT
ATCGACGTGTTTCCGCCCCACAGCCAGCAGCAGATAAGAACACAGCTTGCCAGCACCCTGAAGGGCGTCGTGACCCAGCA
GCTTGTGCCGCTGGCCTCCGGTGAAGGCCGAATGGCAGCCCTCGAGGTGATGACAGGCACCGACGCGGTGCTCAACCTTA
TCCGTGAAAACAAAACCCATCAGCTTTCCTCAGCCATGCAGACCGGCAGCCGGGACGGTATGAACACCCTGAACAGCCAC
TTGGCCAAGCTGGTAAAAGAAGGAAAGATCGGCTTTGATACCGGCCTCCAGTGGTCGTCTGACAAAAACGAGTTTAACCA
ATACTTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.854 |
98.281 |
0.49 |
| pilT | Acinetobacter baylyi ADP1 |
46.647 |
98.281 |
0.458 |
| pilT | Neisseria meningitidis 8013 |
48.328 |
94.269 |
0.456 |
| pilT | Legionella pneumophila strain Lp02 |
45.797 |
98.854 |
0.453 |
| pilT | Legionella pneumophila strain ERS1305867 |
45.797 |
98.854 |
0.453 |
| pilT | Neisseria gonorrhoeae MS11 |
48.024 |
94.269 |
0.453 |
| pilT | Acinetobacter nosocomialis M2 |
45.19 |
98.281 |
0.444 |
| pilT | Acinetobacter baumannii D1279779 |
45.19 |
98.281 |
0.444 |
| pilT | Acinetobacter baumannii strain A118 |
45.19 |
98.281 |
0.444 |
| pilT | Pseudomonas aeruginosa PAK |
46.667 |
94.556 |
0.441 |
| pilT | Pseudomonas stutzeri DSM 10701 |
44.898 |
98.281 |
0.441 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
45.732 |
93.983 |
0.43 |
| pilT | Vibrio cholerae strain A1552 |
45.732 |
93.983 |
0.43 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.896 |
95.989 |
0.393 |