Detailed information NTG0635195

Bioinformatically predicted

Overview

• Name: pilT
• Type: Machinery gene
• Locus tag: LRR78_RS22120
• Genome accession: NZ_CP089094
• Coordinates: 4617852..4618958 (+)
• Length: 368 a.a.
• NCBI ID: WP_002742598.1
• Uniprot ID: A0AB33BRR3
• Organism: Microcystis aeruginosa FACHB-905 = DIANCHI905
• Function: type IV pilus retraction (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4612852..4623958

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LRR78_RS22105 (LRR78_22105)	-	4613985..4614626 (+)	642	WP_002742601.1	HAD-IA family hydrolase	-
LRR78_RS22110 (LRR78_22110)	grpE	4614721..4615443 (-)	723	WP_002742600.1	nucleotide exchange factor GrpE	-
LRR78_RS22115 (LRR78_22115)	pilB/pilB1	4615684..4617699 (+)	2016	WP_002742599.1	GspE/PulE family protein	Machinery gene
LRR78_RS22120 (LRR78_22120)	pilT	4617852..4618958 (+)	1107	WP_002742598.1	type IV pilus twitching motility protein PilT	Machinery gene
LRR78_RS22125 (LRR78_22125)	-	4619099..4620313 (+)	1215	WP_036400185.1	type II secretion system F family protein	-
LRR78_RS22130 (LRR78_22130)	-	4620534..4623104 (-)	2571	WP_004156918.1	TIGR03960 family B12-binding radical SAM protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40593.94 Da
• Isoelectric Point: 7.8137

>NTDB_id=635195 LRR78_RS22120 WP_002742598.1 4617852..4618958(+) (pilT) [Microcystis aeruginosa FACHB-905 = DIANCHI905]
MELMIEDLMEQLVEMGGSDMHIQSRAPVYFRISGKLIPINEKSLTPQDCQKLIFSMLNNTQIKELEQNWELDCSYGVKGL
ARFRINVYKERGAYAACLRALSSKMPNFEQLNLPAVIRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTSSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALRSALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTSSAAGTVD
RIIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGM
QTMEQGLANLVVSGVISFEEAISKSSKPDELQRLVAGSVANAKTKARF

Nucleotide

• Length: 1107 bp

>NTDB_id=635195 LRR78_RS22120 WP_002742598.1 4617852..4618958(+) (pilT) [Microcystis aeruginosa FACHB-905 = DIANCHI905]
ATGGAATTAATGATCGAAGATTTAATGGAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCCCGTGCGCC
GGTCTATTTTCGCATTAGTGGCAAACTCATCCCGATTAATGAAAAATCTTTAACCCCGCAAGATTGTCAGAAATTGATTT
TTAGTATGCTCAATAATACTCAAATAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCATACGGGGTGAAAGGATTA
GCAAGATTTAGGATCAATGTTTATAAAGAAAGGGGAGCCTATGCAGCTTGTTTACGCGCTTTGTCCTCTAAAATGCCTAA
CTTTGAACAATTAAATTTACCAGCAGTGATCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACTGGCCAAA
CAGGTTCAGGTAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATCGGACTAGTTCTGAACATATTTTGACTGTA
GAAGACCCAATTGAATACGTTTTTCCTAATATAAAAAGCCTGTTTCACCAACGACAAAAAGGAGAAGATACCAAGAGTTT
TGCTAACGCATTAAGATCAGCGTTACGAGAAGACCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTA
GTTTGGCAATTACGGCGGCGGAAACCGGTCACTTAGTCTTCGGAACCCTACACACTAGCTCGGCAGCGGGAACAGTGGAT
CGGATTATTGACGTTTTCCCCGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAATTCTTTACTAGCAGTTTTTAG
TCAAAACCTAGTCAAGAAAAAAAATCCCAAACCGGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTC
CAGCGATCGCCAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTTTACTCGGCAATTCAAACGGGAATGAAGCTAGGAATG
CAAACTATGGAACAGGGATTAGCTAATTTAGTTGTTAGCGGTGTTATATCCTTTGAAGAGGCAATTTCTAAAAGTAGTAA
ACCCGATGAATTACAACGTCTGGTCGCTGGGTCCGTTGCTAACGCCAAAACTAAAGCCCGTTTCTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (14-273)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilT	Pseudomonas aeruginosa PAK	51.297	94.293	0.484
pilT	Legionella pneumophila strain Lp02	51.594	93.75	0.484
pilT	Legionella pneumophila strain ERS1305867	51.594	93.75	0.484
pilT	Pseudomonas stutzeri DSM 10701	50.432	94.293	0.476
pilT	Acinetobacter nosocomialis M2	50.432	94.293	0.476
pilT	Acinetobacter baumannii D1279779	50.432	94.293	0.476
pilT	Acinetobacter baumannii strain A118	50.432	94.293	0.476
pilT	Acinetobacter baylyi ADP1	49.856	94.293	0.47
pilT	Vibrio cholerae strain A1552	49.706	92.391	0.459
pilT	Vibrio cholerae O1 biovar El Tor strain E7946	49.706	92.391	0.459
pilT	Neisseria meningitidis 8013	49.263	92.12	0.454
pilT	Neisseria gonorrhoeae MS11	48.968	92.12	0.451
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	44.571	95.109	0.424