Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | KDJ21_RS21270 | Genome accession | NZ_CP088268 |
| Coordinates | 4208945..4209682 (-) | Length | 245 a.a. |
| NCBI ID | WP_232273499.1 | Uniprot ID | - |
| Organism | Metabacillus litoralis strain NCTR108 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 4203945..4214682
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KDJ21_RS21255 (KDJ21_021255) | xerC | 4204157..4205065 (-) | 909 | WP_212134527.1 | tyrosine recombinase XerC | - |
| KDJ21_RS21260 (KDJ21_021260) | trmFO | 4205138..4206448 (-) | 1311 | WP_212134525.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| KDJ21_RS21265 (KDJ21_021265) | topA | 4206563..4208638 (-) | 2076 | WP_212134523.1 | type I DNA topoisomerase | - |
| KDJ21_RS21270 (KDJ21_021270) | dprA | 4208945..4209682 (-) | 738 | WP_232273499.1 | DNA-processing protein DprA | Machinery gene |
| KDJ21_RS21275 (KDJ21_021275) | sucD | 4209892..4210794 (-) | 903 | WP_098796279.1 | succinate--CoA ligase subunit alpha | - |
| KDJ21_RS21280 (KDJ21_021280) | sucC | 4210813..4211973 (-) | 1161 | WP_212134518.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| KDJ21_RS21285 (KDJ21_021285) | - | 4212224..4212499 (-) | 276 | WP_212134516.1 | EscU/YscU/HrcU family type III secretion system export apparatus switch protein | - |
| KDJ21_RS21290 (KDJ21_021290) | - | 4212496..4214031 (-) | 1536 | WP_212134514.1 | flagellar hook-length control protein FliK | - |
Sequence
Protein
Download Length: 245 a.a. Molecular weight: 27383.51 Da Isoelectric Point: 9.6151
>NTDB_id=633648 KDJ21_RS21270 WP_232273499.1 4208945..4209682(-) (dprA) [Metabacillus litoralis strain NCTR108]
MKKHKIDNIKTEYFSHSADLLIKKYNQQNISFLPLFDPNYPYLLKQIADPPPFLFYKGNITLASRKNLISVVGTRYPSEY
GVKALEHVLKPLIREKWVIVSGLAKGIDTLAHEAALNHGGETIAVIGGGLEHIYPRQNQTLANKLMTSNLILSEHSPSTS
PQKWHFPKRNRIISGISLGTLIIQAKQRSGSLITAHQALEQNREVFAIPGSIFDECSIGGNELIQNGAKLVQHASHIFEE
FPQEV
MKKHKIDNIKTEYFSHSADLLIKKYNQQNISFLPLFDPNYPYLLKQIADPPPFLFYKGNITLASRKNLISVVGTRYPSEY
GVKALEHVLKPLIREKWVIVSGLAKGIDTLAHEAALNHGGETIAVIGGGLEHIYPRQNQTLANKLMTSNLILSEHSPSTS
PQKWHFPKRNRIISGISLGTLIIQAKQRSGSLITAHQALEQNREVFAIPGSIFDECSIGGNELIQNGAKLVQHASHIFEE
FPQEV
Nucleotide
Download Length: 738 bp
>NTDB_id=633648 KDJ21_RS21270 WP_232273499.1 4208945..4209682(-) (dprA) [Metabacillus litoralis strain NCTR108]
GTGAAGAAACATAAAATAGATAACATAAAAACTGAGTATTTTTCTCACTCAGCTGATCTCCTCATTAAAAAATATAATCA
GCAAAACATTTCTTTTCTTCCCCTTTTTGATCCTAATTATCCTTATTTGTTAAAGCAAATTGCTGATCCGCCTCCATTTT
TATTTTATAAAGGTAATATCACCCTTGCTTCTCGTAAAAATCTTATTAGTGTAGTTGGTACAAGATATCCGTCTGAATAT
GGTGTTAAAGCCCTTGAGCATGTGTTAAAGCCTCTTATCCGAGAAAAATGGGTTATTGTAAGTGGTTTAGCTAAAGGAAT
CGATACTTTAGCACATGAAGCAGCACTAAACCATGGGGGTGAAACAATTGCCGTAATTGGTGGAGGATTAGAGCATATAT
ATCCTAGGCAGAATCAAACGTTGGCAAACAAGCTAATGACTTCAAATCTTATTCTTTCAGAACATTCTCCTTCGACATCA
CCTCAAAAATGGCATTTTCCTAAAAGAAATCGAATTATTAGTGGTATTTCTTTGGGGACACTTATTATCCAAGCTAAGCA
AAGAAGTGGTTCACTAATAACTGCACATCAAGCATTGGAGCAAAACCGAGAAGTGTTTGCCATACCAGGATCTATTTTTG
ATGAGTGTAGTATTGGTGGAAATGAACTAATACAAAACGGGGCAAAATTAGTACAACATGCATCACATATATTTGAGGAA
TTTCCTCAAGAAGTCTAA
GTGAAGAAACATAAAATAGATAACATAAAAACTGAGTATTTTTCTCACTCAGCTGATCTCCTCATTAAAAAATATAATCA
GCAAAACATTTCTTTTCTTCCCCTTTTTGATCCTAATTATCCTTATTTGTTAAAGCAAATTGCTGATCCGCCTCCATTTT
TATTTTATAAAGGTAATATCACCCTTGCTTCTCGTAAAAATCTTATTAGTGTAGTTGGTACAAGATATCCGTCTGAATAT
GGTGTTAAAGCCCTTGAGCATGTGTTAAAGCCTCTTATCCGAGAAAAATGGGTTATTGTAAGTGGTTTAGCTAAAGGAAT
CGATACTTTAGCACATGAAGCAGCACTAAACCATGGGGGTGAAACAATTGCCGTAATTGGTGGAGGATTAGAGCATATAT
ATCCTAGGCAGAATCAAACGTTGGCAAACAAGCTAATGACTTCAAATCTTATTCTTTCAGAACATTCTCCTTCGACATCA
CCTCAAAAATGGCATTTTCCTAAAAGAAATCGAATTATTAGTGGTATTTCTTTGGGGACACTTATTATCCAAGCTAAGCA
AAGAAGTGGTTCACTAATAACTGCACATCAAGCATTGGAGCAAAACCGAGAAGTGTTTGCCATACCAGGATCTATTTTTG
ATGAGTGTAGTATTGGTGGAAATGAACTAATACAAAACGGGGCAAAATTAGTACAACATGCATCACATATATTTGAGGAA
TTTCCTCAAGAAGTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.