Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | LAJ61_RS02340 | Genome accession | NZ_CP083409 |
| Coordinates | 542319..543470 (+) | Length | 383 a.a. |
| NCBI ID | WP_224054328.1 | Uniprot ID | - |
| Organism | Moraxella osloensis strain FLMOS1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 537319..548470
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LAJ61_RS02320 (LAJ61_02310) | - | 537534..538883 (-) | 1350 | WP_224054325.1 | diguanylate cyclase | - |
| LAJ61_RS02325 (LAJ61_02315) | - | 539237..539761 (-) | 525 | WP_224054326.1 | C40 family peptidase | - |
| LAJ61_RS02330 (LAJ61_02320) | - | 540187..540912 (-) | 726 | WP_224054327.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| LAJ61_RS02335 (LAJ61_02325) | pilT | 541180..542229 (+) | 1050 | WP_128680027.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| LAJ61_RS02340 (LAJ61_02330) | pilU | 542319..543470 (+) | 1152 | WP_224054328.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| LAJ61_RS02345 (LAJ61_02335) | - | 543542..544078 (-) | 537 | WP_224054329.1 | GNAT family N-acetyltransferase | - |
| LAJ61_RS02350 (LAJ61_02340) | ribF | 544204..545217 (+) | 1014 | WP_224054330.1 | riboflavin biosynthesis protein RibF | - |
Sequence
Protein
Download Length: 383 a.a. Molecular weight: 43004.33 Da Isoelectric Point: 6.0949
>NTDB_id=605672 LAJ61_RS02340 WP_224054328.1 542319..543470(+) (pilU) [Moraxella osloensis strain FLMOS1]
MDFDKLLQLMVQKNGSDLFITADAPPSMKVNGTIMPVTKSALTPEQSMTLVKSVMTPSQIKEFDETLECQFAISDKHQNA
RFRVSAFVQKDCAGMVLRKIETKIPTVEQLNLPPILNEIAMKKRGIVLLVGATGTGKSTTLAAMMGYRNENSRGHIITIE
DPIEYVHEHKGCIITQREVGIDTKSFEAGLKNTLRQAPDVILIGEIRTRETMDYAIQYAETGHLVFATLHANNANQAIDR
IIHFFEAEHHEQILMDLSLNLRAIVAQQLIATPDGKGRRAAIEILLNSQLIGDYIRKGEIHEIKPVMKRSRELGMQTFDQ
ALFDLYENGEITYRDAIKHADSPNDLRLLIKLESKSAHKIDENELNFSLQSDDNSAANENTMF
MDFDKLLQLMVQKNGSDLFITADAPPSMKVNGTIMPVTKSALTPEQSMTLVKSVMTPSQIKEFDETLECQFAISDKHQNA
RFRVSAFVQKDCAGMVLRKIETKIPTVEQLNLPPILNEIAMKKRGIVLLVGATGTGKSTTLAAMMGYRNENSRGHIITIE
DPIEYVHEHKGCIITQREVGIDTKSFEAGLKNTLRQAPDVILIGEIRTRETMDYAIQYAETGHLVFATLHANNANQAIDR
IIHFFEAEHHEQILMDLSLNLRAIVAQQLIATPDGKGRRAAIEILLNSQLIGDYIRKGEIHEIKPVMKRSRELGMQTFDQ
ALFDLYENGEITYRDAIKHADSPNDLRLLIKLESKSAHKIDENELNFSLQSDDNSAANENTMF
Nucleotide
Download Length: 1152 bp
>NTDB_id=605672 LAJ61_RS02340 WP_224054328.1 542319..543470(+) (pilU) [Moraxella osloensis strain FLMOS1]
ATGGATTTTGATAAATTACTGCAGCTAATGGTACAAAAAAACGGCTCTGACCTTTTTATCACCGCTGATGCGCCACCATC
AATGAAAGTCAATGGTACTATCATGCCAGTCACCAAGTCAGCGTTGACCCCAGAGCAATCGATGACGCTGGTCAAAAGCG
TGATGACGCCTAGTCAAATCAAAGAATTTGACGAAACCCTCGAATGCCAGTTTGCCATTAGTGACAAACACCAAAACGCC
CGCTTTCGTGTCTCTGCCTTTGTCCAAAAAGACTGTGCGGGCATGGTGCTACGTAAAATTGAAACCAAAATTCCGACGGT
AGAGCAACTCAATCTACCGCCGATTTTGAATGAAATTGCCATGAAAAAACGCGGTATCGTGCTACTGGTCGGTGCGACGG
GTACGGGTAAATCTACCACGCTGGCGGCTATGATGGGGTATCGCAACGAGAATTCGCGCGGTCATATCATTACCATCGAA
GACCCGATTGAATACGTCCATGAGCACAAAGGCTGTATCATCACCCAACGCGAAGTTGGCATTGATACCAAGTCATTTGA
AGCAGGATTAAAAAATACCCTGCGTCAAGCGCCTGATGTGATTTTGATTGGCGAGATTCGTACCCGCGAAACCATGGATT
ATGCCATTCAATATGCCGAAACAGGGCACTTGGTGTTTGCCACCCTACACGCCAACAATGCCAACCAAGCGATTGACCGT
ATCATTCACTTCTTTGAAGCAGAGCATCATGAGCAGATTTTGATGGATTTGTCATTGAACCTTCGAGCCATTGTAGCGCA
GCAATTGATTGCCACACCTGATGGCAAAGGTCGCCGCGCTGCGATTGAAATTTTGCTCAATTCGCAACTGATTGGGGATT
ACATCCGTAAAGGGGAAATCCACGAAATTAAGCCCGTCATGAAACGCTCTCGCGAACTTGGCATGCAAACCTTTGACCAA
GCGTTGTTTGATTTGTATGAAAATGGCGAAATCACTTACCGCGATGCCATCAAACACGCTGACTCACCCAATGATTTACG
CCTACTCATTAAGCTTGAAAGTAAATCAGCCCATAAAATTGATGAAAATGAACTAAATTTCTCCCTGCAATCTGACGATA
ATAGCGCAGCAAATGAGAACACAATGTTCTAA
ATGGATTTTGATAAATTACTGCAGCTAATGGTACAAAAAAACGGCTCTGACCTTTTTATCACCGCTGATGCGCCACCATC
AATGAAAGTCAATGGTACTATCATGCCAGTCACCAAGTCAGCGTTGACCCCAGAGCAATCGATGACGCTGGTCAAAAGCG
TGATGACGCCTAGTCAAATCAAAGAATTTGACGAAACCCTCGAATGCCAGTTTGCCATTAGTGACAAACACCAAAACGCC
CGCTTTCGTGTCTCTGCCTTTGTCCAAAAAGACTGTGCGGGCATGGTGCTACGTAAAATTGAAACCAAAATTCCGACGGT
AGAGCAACTCAATCTACCGCCGATTTTGAATGAAATTGCCATGAAAAAACGCGGTATCGTGCTACTGGTCGGTGCGACGG
GTACGGGTAAATCTACCACGCTGGCGGCTATGATGGGGTATCGCAACGAGAATTCGCGCGGTCATATCATTACCATCGAA
GACCCGATTGAATACGTCCATGAGCACAAAGGCTGTATCATCACCCAACGCGAAGTTGGCATTGATACCAAGTCATTTGA
AGCAGGATTAAAAAATACCCTGCGTCAAGCGCCTGATGTGATTTTGATTGGCGAGATTCGTACCCGCGAAACCATGGATT
ATGCCATTCAATATGCCGAAACAGGGCACTTGGTGTTTGCCACCCTACACGCCAACAATGCCAACCAAGCGATTGACCGT
ATCATTCACTTCTTTGAAGCAGAGCATCATGAGCAGATTTTGATGGATTTGTCATTGAACCTTCGAGCCATTGTAGCGCA
GCAATTGATTGCCACACCTGATGGCAAAGGTCGCCGCGCTGCGATTGAAATTTTGCTCAATTCGCAACTGATTGGGGATT
ACATCCGTAAAGGGGAAATCCACGAAATTAAGCCCGTCATGAAACGCTCTCGCGAACTTGGCATGCAAACCTTTGACCAA
GCGTTGTTTGATTTGTATGAAAATGGCGAAATCACTTACCGCGATGCCATCAAACACGCTGACTCACCCAATGATTTACG
CCTACTCATTAAGCTTGAAAGTAAATCAGCCCATAAAATTGATGAAAATGAACTAAATTTCTCCCTGCAATCTGACGATA
ATAGCGCAGCAAATGAGAACACAATGTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
68.258 |
92.95 |
0.634 |
| pilU | Acinetobacter baylyi ADP1 |
64.835 |
95.039 |
0.616 |
| pilU | Vibrio cholerae strain A1552 |
54.986 |
91.645 |
0.504 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
42.735 |
91.645 |
0.392 |
| pilT | Acinetobacter baumannii D1279779 |
41.983 |
89.556 |
0.376 |
| pilT | Acinetobacter nosocomialis M2 |
41.983 |
89.556 |
0.376 |
| pilT | Acinetobacter baumannii strain A118 |
41.983 |
89.556 |
0.376 |
| pilT | Legionella pneumophila strain Lp02 |
42.56 |
87.728 |
0.373 |
| pilT | Legionella pneumophila strain ERS1305867 |
42.56 |
87.728 |
0.373 |
| pilT | Acinetobacter baylyi ADP1 |
41.399 |
89.556 |
0.371 |
| pilT | Vibrio cholerae strain A1552 |
41.994 |
86.423 |
0.363 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.994 |
86.423 |
0.363 |
| pilT | Pseudomonas stutzeri DSM 10701 |
40.173 |
90.339 |
0.363 |
| pilT | Pseudomonas aeruginosa PAK |
40.173 |
90.339 |
0.363 |