Detailed information NTG0599970

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: K6974_RS00810
• Genome accession: NZ_CP082204
• Coordinates: 132382..132663 (+)
• Length: 93 a.a.
• NCBI ID: WP_222337409.1
• Uniprot ID: A0A9X4RUQ6
• Organism: Streptococcus suis strain FJSM5
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 127382..137663

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6974_RS00780	-	127719..127907 (+)	189	Protein_119	helix-turn-helix domain-containing protein	-
K6974_RS00785 (K6974_00770)	-	127908..128754 (+)	847	Protein_120	IS630 family transposase	-
K6974_RS00790 (K6974_00775)	-	128941..129300 (+)	360	WP_099875663.1	DUF1033 family protein	-
K6974_RS00795 (K6974_00780)	-	129445..130395 (-)	951	WP_222337411.1	S66 peptidase family protein	-
K6974_RS00800 (K6974_00785)	comYA	130481..131431 (+)	951	WP_222337410.1	competence type IV pilus ATPase ComGA	Machinery gene
K6974_RS00805 (K6974_00790)	comYB	131343..132380 (+)	1038	WP_261311719.1	competence type IV pilus assembly protein ComGB	Machinery gene
K6974_RS00810 (K6974_00795)	comYC	132382..132663 (+)	282	WP_222337409.1	competence type IV pilus major pilin ComGC	Machinery gene
K6974_RS00815 (K6974_00800)	comGD	132644..133051 (+)	408	WP_222337408.1	competence type IV pilus minor pilin ComGD	-
K6974_RS00820 (K6974_00805)	comYE	133023..133316 (+)	294	WP_222337407.1	competence type IV pilus minor pilin ComGE	Machinery gene
K6974_RS00825 (K6974_00810)	comGF/cglF	133303..133737 (+)	435	WP_222337406.1	competence type IV pilus minor pilin ComGF	Machinery gene
K6974_RS00830 (K6974_00815)	comGG	133715..134227 (+)	513	WP_222337405.1	competence type IV pilus minor pilin ComGG	-
K6974_RS00835 (K6974_00820)	-	134455..136536 (+)	2082	WP_172042577.1	autolysin AtlA	-

Sequence

Protein

• Length: 93 a.a.
• Molecular weight: 10462.44 Da
• Isoelectric Point: 8.4285

>NTDB_id=599970 K6974_RS00810 WP_222337409.1 132382..132663(+) (comYC) [Streptococcus suis strain FJSM5]
MKKLIEMKVKAFTLVEMLVVLGIISLLLLIFVPNLSQQKDAIQKKGNAAVVKVVESQMELYELEHDKEATVADLQQAGYI
TEKQAEQYAKAKK

Nucleotide

• Length: 282 bp

>NTDB_id=599970 K6974_RS00810 WP_222337409.1 132382..132663(+) (comYC) [Streptococcus suis strain FJSM5]
ATGAAAAAATTAATTGAAATGAAGGTAAAAGCGTTCACTCTGGTGGAAATGTTAGTTGTTTTGGGTATTATTAGCCTGCT
CTTGCTCATTTTTGTGCCAAATTTGAGCCAGCAGAAGGATGCTATTCAGAAGAAGGGGAATGCGGCTGTTGTCAAAGTAG
TAGAGAGCCAGATGGAGCTCTATGAATTGGAACATGACAAGGAAGCAACGGTGGCAGACTTGCAACAGGCAGGTTATATT
ACTGAAAAACAAGCGGAGCAGTATGCTAAGGCGAAAAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus suis isolate S10	90.323	100	0.903
comGC/cglC	Streptococcus pneumoniae TIGR4	61.957	98.925	0.613
comGC/cglC	Streptococcus pneumoniae Rx1	61.957	98.925	0.613
comGC/cglC	Streptococcus pneumoniae D39	61.957	98.925	0.613
comGC/cglC	Streptococcus pneumoniae R6	61.957	98.925	0.613
comGC/cglC	Streptococcus mitis NCTC 12261	61.957	98.925	0.613
comGC/cglC	Streptococcus mitis SK321	61.957	98.925	0.613
comYC	Streptococcus gordonii str. Challis substr. CH1	62.921	95.699	0.602
comYC	Streptococcus mutans UA140	59.091	94.624	0.559
comYC	Streptococcus mutans UA159	59.091	94.624	0.559
comGC	Lactococcus lactis subsp. cremoris KW2	57.955	94.624	0.548
comGC	Staphylococcus aureus MW2	48.718	83.871	0.409
comGC	Staphylococcus aureus N315	48.718	83.871	0.409
comGC	Bacillus subtilis subsp. subtilis str. 168	49.333	80.645	0.398