Detailed information NTG0058045

Bioinformatically predicted

Overview

• Name: comX/comX2
• Type: Regulator
• Locus tag: SPN034156_RS06045
• Genome accession: NC_021006
• Coordinates: 1122597..1123076 (+)
• Length: 159 a.a.
• NCBI ID: WP_000588860.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae SPN034156
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1117597..1128076

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPN034156_RS06030 (SPN034156_10730)	tilS	1118678..1119955 (+)	1278	WP_001208986.1	tRNA lysidine(34) synthetase TilS	-
SPN034156_RS06035 (SPN034156_10740)	hpt	1119959..1120501 (+)	543	WP_000892185.1	hypoxanthine phosphoribosyltransferase	-
SPN034156_RS06040 (SPN034156_10750)	ftsH	1120517..1122475 (+)	1959	WP_000744554.1	ATP-dependent zinc metalloprotease FtsH	-
SPN034156_RS06045 (SPN034156_10760)	comX/comX2	1122597..1123076 (+)	480	WP_000588860.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19817.45 Da
• Isoelectric Point: 7.3795

>NTDB_id=58045 SPN034156_RS06045 WP_000588860.1 1122597..1123076(+) (comX/comX2) [Streptococcus pneumoniae SPN034156]
MIKELYEEVQGTVYKCRNEYYLHLWELSDWDQEGMLCLHELISREEGLADDIPRLRKYFKTKFRNRILDYIRKQESQKRK
YDKEPYEEVGELSHRISEGGLWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIVFKEFTIRTH

Nucleotide

• Length: 480 bp

>NTDB_id=58045 SPN034156_RS06045 WP_000588860.1 1122597..1123076(+) (comX/comX2) [Streptococcus pneumoniae SPN034156]
ATGATTAAAGAATTGTATGAAGAAGTCCAAGGGACTGTGTATAAGTGTAGAAATGAATATTACCTTCATTTATGGGAATT
GTCGGATTGGGACCAAGAAGGCATGCTCTGCTTACATGAATTGATTAGTAGAGAAGAAGGACTGGCAGACGATATTCCAC
GTTTAAGGAAATATTTCAAAACCAAGTTTCGAAATCGAATTTTAGACTATATCCGTAAGCAGGAAAGTCAGAAGCGTAAA
TACGATAAAGAACCCTATGAAGAAGTGGGTGAGCTCAGTCATCGTATAAGTGAGGGAGGTCTCTGGCTAGATGATTATTA
TCTCTTTCATGAAACACTAAGAGATTATAGAAACAAACAAAGTAAAGAGAAACAAGAAGAACTAGAACGCGTCTTAAGCA
ATGAACGATTTCGAGGGCGTCAAAGAGTATTAAGAGACTTACGCATTGTGTTTAAGGAGTTTACTATCCGTACCCACTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/comX2	Streptococcus pneumoniae Rx1	98.113	100	0.981
comX/comX1	Streptococcus pneumoniae Rx1	98.113	100	0.981
comX/comX2	Streptococcus pneumoniae D39	98.113	100	0.981
comX/comX1	Streptococcus pneumoniae D39	98.113	100	0.981
comX/comX2	Streptococcus pneumoniae R6	98.113	100	0.981
comX/comX1	Streptococcus pneumoniae R6	98.113	100	0.981
comX/comX2	Streptococcus pneumoniae TIGR4	97.484	100	0.975
comX/comX1	Streptococcus pneumoniae TIGR4	97.484	100	0.975
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	90.566	100	0.906
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	90.566	100	0.906
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	88.679	100	0.887
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	88.608	99.371	0.881
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	48.718	98.113	0.478
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	48.718	98.113	0.478
comX/sigX	Streptococcus suis D9	46.358	94.969	0.44
comX/sigX	Streptococcus suis isolate S10	46.358	94.969	0.44
comX/sigX	Streptococcus suis P1/7	46.358	94.969	0.44
comX/sigX	Streptococcus mutans UA159	44.667	94.34	0.421
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40	94.34	0.377
comX	Streptococcus sobrinus strain NIDR 6715-7	38.926	93.711	0.365