Detailed information NTG0554458

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LZ758_RS01665
• Genome accession: NZ_CP090508
• Coordinates: 406013..407158 (-)
• Length: 381 a.a.
• NCBI ID: WP_038229914.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. morus strain Riv11
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 401013..412158

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ758_RS01650 (LZ758_01650)	-	401396..401959 (-)	564	WP_021358455.1	Sua5/YciO/YrdC/YwlC family protein	-
LZ758_RS01655 (LZ758_01655)	-	402073..404520 (-)	2448	WP_038229912.1	DNA topoisomerase I	-
LZ758_RS01660 (LZ758_01660)	-	405494..405967 (-)	474	WP_004089636.1	DUF494 family protein	-
LZ758_RS01665 (LZ758_01665)	dprA	406013..407158 (-)	1146	WP_038229914.1	DNA-processing protein DprA	Machinery gene
LZ758_RS01670 (LZ758_01670)	-	407249..408403 (-)	1155	WP_038229916.1	LysM peptidoglycan-binding domain-containing protein	-
LZ758_RS01675 (LZ758_01675)	def	408542..409054 (+)	513	WP_038229918.1	peptide deformylase	-
LZ758_RS01680 (LZ758_01680)	fmt	409160..410083 (+)	924	WP_038229920.1	methionyl-tRNA formyltransferase	-
LZ758_RS01685 (LZ758_01685)	rsmB	410080..411375 (+)	1296	WP_140161051.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40383.20 Da
• Isoelectric Point: 8.3549

>NTDB_id=554458 LZ758_RS01665 WP_038229914.1 406013..407158(-) (dprA) [Xylella fastidiosa subsp. morus strain Riv11]
MASPSHSDSQDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAAGPNAWRASGCNTMQCTRLVAPDPNAMARIQHWLATP
YHHLLGWHDPDYPPLLRHVPSPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGIISGMAAGIDA
TAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLHARITTDGAVISEYPPGTQPRAAHFPQRNRIIAGLALGTLVVEAGAR
SGALITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVATLAAPLAHTLRERLDAPSWPVAPLLS
TPNSKDPKYHTLWQALAHDPMSMDSLIDRTGLTAATLSSMLLTLELEGKVVVEHGRYTRTA

Nucleotide

• Length: 1146 bp

>NTDB_id=554458 LZ758_RS01665 WP_038229914.1 406013..407158(-) (dprA) [Xylella fastidiosa subsp. morus strain Riv11]
ATGGCATCCCCATCCCACTCAGACTCCCAAGACACGGACGCGCTGCTACGACTGGTCCTCGCCGGAGGCAGAAGCGCACC
GCGGCGCCAACTACTGGATTACCACGGCACGCCACACGCCGCATTGGCCGCCGGTCCAAATGCTTGGCGCGCCAGTGGCT
GTAACACAATGCAGTGCACCCGCCTAGTTGCTCCCGATCCCAATGCAATGGCACGCATACAACACTGGTTGGCAACGCCT
TACCATCACCTGCTCGGTTGGCACGATCCGGATTACCCGCCATTACTGCGTCATGTCCCTTCGCCACCCTTAGCATTGTT
CATCGCAGGGAATCCAATACTGCTATGGCACGCCAGTATTGCCATCGTCGGCAGCCGCCAGCCCAGTGCCGGCGGCCTTG
ATCATTCCTATGGCTTCGCACAGGCATTAGCGGCACGCGGCCTGGGCATCATCAGCGGAATGGCAGCCGGAATCGACGCT
ACAGCACACGAAGCCGCACTCAGCATACCCAGTGGGCATACGGTCGCAGTCCTTGGTACGGGCCCAGATGTGCCATACCC
AGCACGTCACAAAAAACTGCACGCACGTATCACCACAGACGGAGCGGTCATCAGCGAATATCCACCAGGAACCCAACCAC
GGGCTGCCCACTTTCCACAACGCAACAGGATTATTGCAGGCTTGGCGCTGGGCACACTGGTGGTCGAAGCTGGAGCTCGT
TCCGGCGCACTGATCACCGCTCGACTGGCAGCAGAAGCAGGGCGTGCTGTATTCGCAGTACCAGGATCGCTACACAACCC
TATGACACGCGGCTGCCACCAGTTGATCCGTCAAGGCGCAACACTGGTTCAAGACATAGACCAAATATTGGAGGACGTCG
CTACGCTAGCAGCGCCGTTAGCACACACCTTGCGTGAGCGCCTTGATGCTCCTAGTTGGCCTGTAGCGCCATTATTAAGC
ACACCAAACAGTAAAGACCCTAAATACCACACACTTTGGCAGGCCCTTGCACATGACCCAATGTCCATGGACTCATTAAT
TGACCGTACTGGATTGACGGCAGCCACACTCTCCTCCATGCTTCTAACCTTGGAACTGGAAGGAAAGGTTGTCGTAGAAC
ACGGACGTTATACACGTACCGCTTAG

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (321-375)

• DNA recombination-mediator protein A (DNA_processg_A) (83-284)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	41.176	89.239	0.367
dprA	Vibrio cholerae strain A1552	41.176	89.239	0.367
dprA	Acinetobacter baumannii D1279779	37.602	96.325	0.362