Detailed information NTG0518076

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: JDY60_RS07290
• Genome accession: NZ_CP066172
• Coordinates: 1531783..1532106 (-)
• Length: 107 a.a.
• NCBI ID: WP_200370536.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain SF100
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1526783..1537106

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JDY60_RS07250 (JDY60_07250)	rnpA	1526909..1527280 (-)	372	WP_000748120.1	ribonuclease P protein component	-
JDY60_RS07255 (JDY60_07255)	-	1527430..1528620 (-)	1191	WP_049490206.1	acetate kinase	-
JDY60_RS07260 (JDY60_07260)	comYH	1528671..1529624 (-)	954	WP_049490205.1	class I SAM-dependent methyltransferase	Machinery gene
JDY60_RS07265 (JDY60_07265)	-	1529683..1530273 (-)	591	WP_049490204.1	class I SAM-dependent methyltransferase	-
JDY60_RS07270 (JDY60_07270)	comGG/cglG	1530306..1530719 (-)	414	WP_070568123.1	competence type IV pilus minor pilin ComGG	Machinery gene
JDY60_RS07275 (JDY60_07275)	comGF/cglF	1530697..1531158 (-)	462	WP_070568120.1	competence type IV pilus minor pilin ComGF	Machinery gene
JDY60_RS07280 (JDY60_07280)	comGE/cglE	1531121..1531423 (-)	303	WP_200370534.1	competence type IV pilus minor pilin ComGE	Machinery gene
JDY60_RS07285 (JDY60_07285)	comGD/cglD	1531386..1531820 (-)	435	WP_200370535.1	competence type IV pilus minor pilin ComGD	Machinery gene
JDY60_RS07290 (JDY60_07290)	comGC/cglC	1531783..1532106 (-)	324	WP_200370536.1	competence type IV pilus major pilin ComGC	Machinery gene
JDY60_RS07295 (JDY60_07295)	comGB/cglB	1532108..1533124 (-)	1017	WP_000355379.1	competence type IV pilus assembly protein ComGB	Machinery gene
JDY60_RS07300 (JDY60_07300)	comGA/cglA/cilD	1533072..1534013 (-)	942	WP_000249575.1	competence type IV pilus ATPase ComGA	Machinery gene
JDY60_RS07305 (JDY60_07305)	-	1534083..1534448 (-)	366	WP_000286396.1	DUF1033 family protein	-
JDY60_RS07310 (JDY60_07310)	nagA	1534603..1535754 (-)	1152	WP_001134447.1	N-acetylglucosamine-6-phosphate deacetylase	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 11835.91 Da
• Isoelectric Point: 9.9097

>NTDB_id=518076 JDY60_RS07290 WP_200370536.1 1531783..1532106(-) (comGC/cglC) [Streptococcus oralis strain SF100]
MKKLMTNLKKAKVQAFTLVEMLVVLLIISVLLLLFVPNLTKQKDAVDDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITAEQAKAYKDYHAKQKTSQTVAD

Nucleotide

• Length: 324 bp

>NTDB_id=518076 JDY60_RS07290 WP_200370536.1 1531783..1532106(-) (comGC/cglC) [Streptococcus oralis strain SF100]
ATGAAAAAACTCATGACAAATTTAAAAAAAGCCAAGGTTCAAGCTTTCACTCTGGTAGAGATGTTAGTCGTCTTGCTCAT
CATCAGCGTACTCCTCTTGCTCTTTGTGCCCAATTTGACCAAGCAAAAGGATGCCGTAGATGACAAAGGAAAAGCTGCTG
TTGTCAAGGTCGTAGAAAGCCAGGCAGAGCTCTATAGTCTGGACAAGAATGAAGATGCTAGCCTTAGCAAATTACAAGCG
GACGGTCGTATCACAGCTGAGCAAGCCAAAGCTTATAAAGACTACCATGCAAAACAAAAAACCAGTCAAACGGTTGCAGA
TTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus mitis NCTC 12261	92.523	100	0.925
comGC/cglC	Streptococcus mitis SK321	89.899	92.523	0.832
comGC/cglC	Streptococcus pneumoniae Rx1	87.879	92.523	0.813
comGC/cglC	Streptococcus pneumoniae D39	87.879	92.523	0.813
comGC/cglC	Streptococcus pneumoniae R6	87.879	92.523	0.813
comGC/cglC	Streptococcus pneumoniae TIGR4	86.869	92.523	0.804
comYC	Streptococcus gordonii str. Challis substr. CH1	66.667	98.131	0.654
comYC	Streptococcus mutans UA140	69.072	90.654	0.626
comYC	Streptococcus mutans UA159	69.072	90.654	0.626
comYC	Streptococcus suis isolate S10	65.909	82.243	0.542
comGC	Lactococcus lactis subsp. cremoris KW2	55.446	94.393	0.523
comGC	Staphylococcus aureus MW2	52.703	69.159	0.364
comGC	Staphylococcus aureus N315	52.703	69.159	0.364