Detailed information NTG0518075

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: JDY60_RS07285
• Genome accession: NZ_CP066172
• Coordinates: 1531386..1531820 (-)
• Length: 144 a.a.
• NCBI ID: WP_200370535.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain SF100
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1526386..1536820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JDY60_RS07250 (JDY60_07250)	rnpA	1526909..1527280 (-)	372	WP_000748120.1	ribonuclease P protein component	-
JDY60_RS07255 (JDY60_07255)	-	1527430..1528620 (-)	1191	WP_049490206.1	acetate kinase	-
JDY60_RS07260 (JDY60_07260)	comYH	1528671..1529624 (-)	954	WP_049490205.1	class I SAM-dependent methyltransferase	Machinery gene
JDY60_RS07265 (JDY60_07265)	-	1529683..1530273 (-)	591	WP_049490204.1	class I SAM-dependent methyltransferase	-
JDY60_RS07270 (JDY60_07270)	comGG/cglG	1530306..1530719 (-)	414	WP_070568123.1	competence type IV pilus minor pilin ComGG	Machinery gene
JDY60_RS07275 (JDY60_07275)	comGF/cglF	1530697..1531158 (-)	462	WP_070568120.1	competence type IV pilus minor pilin ComGF	Machinery gene
JDY60_RS07280 (JDY60_07280)	comGE/cglE	1531121..1531423 (-)	303	WP_200370534.1	competence type IV pilus minor pilin ComGE	Machinery gene
JDY60_RS07285 (JDY60_07285)	comGD/cglD	1531386..1531820 (-)	435	WP_200370535.1	competence type IV pilus minor pilin ComGD	Machinery gene
JDY60_RS07290 (JDY60_07290)	comGC/cglC	1531783..1532106 (-)	324	WP_200370536.1	competence type IV pilus major pilin ComGC	Machinery gene
JDY60_RS07295 (JDY60_07295)	comGB/cglB	1532108..1533124 (-)	1017	WP_000355379.1	competence type IV pilus assembly protein ComGB	Machinery gene
JDY60_RS07300 (JDY60_07300)	comGA/cglA/cilD	1533072..1534013 (-)	942	WP_000249575.1	competence type IV pilus ATPase ComGA	Machinery gene
JDY60_RS07305 (JDY60_07305)	-	1534083..1534448 (-)	366	WP_000286396.1	DUF1033 family protein	-
JDY60_RS07310 (JDY60_07310)	nagA	1534603..1535754 (-)	1152	WP_001134447.1	N-acetylglucosamine-6-phosphate deacetylase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15843.31 Da
• Isoelectric Point: 10.6253

>NTDB_id=518075 JDY60_RS07285 WP_200370535.1 1531386..1531820(-) (comGD/cglD) [Streptococcus oralis strain SF100]
MQNKKPVKRLQIKAFTMLESLLVLGLVSILALGLSGSVQSSFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQA
ISNGSQKLTVPKGIQAPSGQSIIFDRSGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=518075 JDY60_RS07285 WP_200370535.1 1531386..1531820(-) (comGD/cglD) [Streptococcus oralis strain SF100]
ATGCAAAACAAAAAACCAGTCAAACGGTTGCAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTAGTTTTGGGACTTGT
GAGTATCCTTGCTTTGGGCTTGTCCGGTTCTGTTCAGTCCAGTTTTGCGGCGGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACGCAAAAACGCAGTGTTGCCAGTCAGCAAAAGACTAGTCTAAACTTAGATGGGCAGGCA
ATCAGCAATGGTAGTCAAAAGTTGACCGTTCCTAAAGGGATTCAGGCACCATCAGGACAAAGTATTATATTTGACCGATC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACTAGCAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACTAAAAATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	93.75	100	0.938
comGD/cglD	Streptococcus pneumoniae Rx1	96.241	92.361	0.889
comGD/cglD	Streptococcus pneumoniae D39	96.241	92.361	0.889
comGD/cglD	Streptococcus pneumoniae R6	96.241	92.361	0.889
comGD/cglD	Streptococcus mitis SK321	94.737	92.361	0.875
comGD/cglD	Streptococcus pneumoniae TIGR4	94.737	92.361	0.875
comYD	Streptococcus gordonii str. Challis substr. CH1	56.061	91.667	0.514
comYD	Streptococcus mutans UA140	48.062	89.583	0.431
comYD	Streptococcus mutans UA159	48.062	89.583	0.431