Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | I6G31_RS17805 | Genome accession | NZ_CP065722 |
| Coordinates | 1923441..1923593 (-) | Length | 50 a.a. |
| NCBI ID | WP_232240070.1 | Uniprot ID | - |
| Organism | Proteus penneri strain FDAARGOS_874 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1918441..1928593
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6G31_RS08825 (I6G31_08825) | - | 1920322..1920879 (+) | 558 | Protein_1717 | gamma carbonic anhydrase family protein | - |
| I6G31_RS08830 (I6G31_08830) | - | 1920844..1921113 (-) | 270 | WP_197939083.1 | DUF1488 domain-containing protein | - |
| I6G31_RS08835 (I6G31_08835) | aroE | 1921110..1921914 (-) | 805 | Protein_1719 | shikimate dehydrogenase | - |
| I6G31_RS08840 (I6G31_08840) | tsaC | 1921937..1922493 (-) | 557 | Protein_1720 | L-threonylcarbamoyladenylate synthase type 1 TsaC | - |
| I6G31_RS08845 (I6G31_08845) | - | 1922486..1923038 (-) | 553 | Protein_1721 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| I6G31_RS17800 | - | 1923057..1923200 (-) | 144 | WP_232240069.1 | hypothetical protein | - |
| I6G31_RS17805 | dprA | 1923441..1923593 (-) | 153 | WP_232240070.1 | DNA-processing protein DprA | Machinery gene |
| I6G31_RS08855 (I6G31_08855) | def | 1924296..1924817 (+) | 522 | Protein_1724 | peptide deformylase | - |
| I6G31_RS08860 (I6G31_08860) | fmt | 1924848..1925775 (+) | 928 | Protein_1725 | methionyl-tRNA formyltransferase | - |
| I6G31_RS08865 (I6G31_08865) | rsmB | 1925858..1927078 (+) | 1221 | Protein_1726 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| I6G31_RS08870 (I6G31_08870) | trkA | 1927181..1928517 (+) | 1337 | Protein_1727 | Trk system potassium transporter TrkA | - |
Sequence
Protein
Download Length: 50 a.a. Molecular weight: 5612.57 Da Isoelectric Point: 8.5215
>NTDB_id=513529 I6G31_RS17805 WP_232240070.1 1923441..1923593(-) (dprA) [Proteus penneri strain FDAARGOS_874]
MTPPLARYFPQRNRIISGLSTALLIVEAELKVVFNNSNYALQQGKECLCT
MTPPLARYFPQRNRIISGLSTALLIVEAELKVVFNNSNYALQQGKECLCT
Nucleotide
Download Length: 153 bp
>NTDB_id=513529 I6G31_RS17805 WP_232240070.1 1923441..1923593(-) (dprA) [Proteus penneri strain FDAARGOS_874]
ATGACACCACCTTTAGCACGCTATTTTCCTCAACGTAATCGGATTATTAGTGGCCTAAGTACTGCACTGCTTATTGTAGA
AGCAGAATTAAAAGTGGTCTTTAATAACAGCAATTATGCTTTGCAACAAGGTAAAGAGTGTTTGTGTACCTGA
ATGACACCACCTTTAGCACGCTATTTTCCTCAACGTAATCGGATTATTAGTGGCCTAAGTACTGCACTGCTTATTGTAGA
AGCAGAATTAAAAGTGGTCTTTAATAACAGCAATTATGCTTTGCAACAAGGTAAAGAGTGTTTGTGTACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Acinetobacter baumannii D1279779 |
55.556 |
90 |
0.5 |
| dprA | Acinetobacter baumannii strain A118 |
55.556 |
90 |
0.5 |
| dprA | Acinetobacter baylyi ADP1 |
55.556 |
90 |
0.5 |
| dprA | Vibrio cholerae strain A1552 |
52.174 |
92 |
0.48 |
| dprA | Vibrio campbellii strain DS40M4 |
54.545 |
88 |
0.48 |
| dprA | Glaesserella parasuis strain SC1401 |
51.111 |
90 |
0.46 |
| dprA | Haemophilus influenzae Rd KW20 |
48.936 |
94 |
0.46 |
| dprA | Legionella pneumophila strain ERS1305867 |
45.833 |
96 |
0.44 |
| dprA | Thermus thermophilus HB27 |
43.75 |
96 |
0.42 |
| dprA | Bacillus subtilis subsp. subtilis str. 168 |
45.652 |
92 |
0.42 |
| dprA | Latilactobacillus sakei subsp. sakei 23K |
43.182 |
88 |
0.38 |
| dprA | Lactococcus lactis subsp. cremoris KW2 |
43.182 |
88 |
0.38 |
| dprA | Neisseria gonorrhoeae strain FA1090 |
39.583 |
96 |
0.38 |
| dprA | Neisseria gonorrhoeae MS11 |
39.583 |
96 |
0.38 |
| dprA | Staphylococcus aureus N315 |
66.667 |
54 |
0.36 |
| dprA | Staphylococcus aureus MW2 |
66.667 |
54 |
0.36 |