Detailed information NTG0506521

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: I2436_RS00710
• Genome accession: NZ_CP065060
• Coordinates: 124233..124556 (+)
• Length: 107 a.a.
• NCBI ID: WP_206152868.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain SEZ28
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 119233..129556

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I2436_RS00690	-	119498..121500 (+)	2003	Protein_100	DUF1430 domain-containing protein	-
I2436_RS00695 (GDAKBCAL_00139)	-	121502..122170 (+)	669	WP_043052639.1	ATP-binding cassette domain-containing protein	-
I2436_RS00700 (GDAKBCAL_00140)	comGA/cglA	122327..123265 (+)	939	WP_164437804.1	competence type IV pilus ATPase ComGA	Machinery gene
I2436_RS00705 (GDAKBCAL_00141)	comYB	123198..124232 (+)	1035	WP_227687788.1	competence type IV pilus assembly protein ComGB	Machinery gene
I2436_RS00710 (GDAKBCAL_00142)	comGC/cglC	124233..124556 (+)	324	WP_206152868.1	competence type IV pilus major pilin ComGC	Machinery gene
I2436_RS00715 (GDAKBCAL_00143)	comGD	124534..124959 (+)	426	WP_206152869.1	competence type IV pilus minor pilin ComGD	-
I2436_RS00720 (GDAKBCAL_00144)	comGE	124916..125206 (+)	291	WP_014622143.1	competence type IV pilus minor pilin ComGE	-
I2436_RS00725 (GDAKBCAL_00145)	comYF	125193..125627 (+)	435	WP_037580631.1	competence type IV pilus minor pilin ComGF	Machinery gene
I2436_RS00730 (GDAKBCAL_00146)	comGG	125605..125967 (+)	363	WP_012514785.1	competence type IV pilus minor pilin ComGG	-
I2436_RS00735 (GDAKBCAL_00147)	comYH	126029..126982 (+)	954	WP_012514788.1	class I SAM-dependent methyltransferase	Machinery gene
I2436_RS00740 (GDAKBCAL_00148)	-	127042..128244 (+)	1203	WP_012514789.1	acetate kinase	-
I2436_RS00745 (GDAKBCAL_00149)	-	128616..129230 (-)	615	WP_021320266.1	hypothetical protein	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 12177.21 Da
• Isoelectric Point: 8.4125

>NTDB_id=506521 I2436_RS00710 WP_206152868.1 124233..124556(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain SEZ28]
MKMRLSILKDQGVQAFTLLEMLLVLLIISVLMLLFVPNLSKQKDKVTDTGNAAVVKLVENQAELYELSHGEKPSLKQLQE
DGSISDKQQKAYQDYYAKHKDEAKRLN

Nucleotide

• Length: 324 bp

>NTDB_id=506521 I2436_RS00710 WP_206152868.1 124233..124556(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain SEZ28]
ATGAAAATGAGATTATCAATCTTAAAAGATCAAGGTGTTCAGGCCTTCACTTTACTGGAAATGCTTCTGGTTTTGTTAAT
CATTAGTGTTTTGATGCTGTTATTTGTTCCAAATTTAAGTAAGCAAAAGGATAAGGTGACAGACACAGGCAATGCTGCGG
TGGTAAAGCTGGTTGAAAATCAGGCAGAGCTTTATGAATTATCACATGGGGAAAAGCCAAGCCTGAAGCAGCTGCAAGAG
GATGGAAGCATCAGTGACAAGCAACAAAAGGCTTATCAGGATTATTATGCAAAGCATAAAGATGAAGCTAAGAGGCTCAA
TTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (14-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus mitis SK321	58.879	100	0.589
comYC	Streptococcus gordonii str. Challis substr. CH1	62.245	91.589	0.57
comGC/cglC	Streptococcus mitis NCTC 12261	61.616	92.523	0.57
comGC/cglC	Streptococcus pneumoniae TIGR4	57.009	100	0.57
comGC/cglC	Streptococcus pneumoniae Rx1	57.009	100	0.57
comGC/cglC	Streptococcus pneumoniae D39	57.009	100	0.57
comGC/cglC	Streptococcus pneumoniae R6	57.009	100	0.57
comYC	Streptococcus mutans UA140	57.576	92.523	0.533
comYC	Streptococcus mutans UA159	57.576	92.523	0.533
comGC	Lactococcus lactis subsp. cremoris KW2	56.842	88.785	0.505
comYC	Streptococcus suis isolate S10	60	74.766	0.449
comGC	Staphylococcus aureus MW2	50	72.897	0.364
comGC	Staphylococcus aureus N315	50	72.897	0.364