Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | I2436_RS00735 | Genome accession | NZ_CP065060 |
| Coordinates | 126029..126982 (+) | Length | 317 a.a. |
| NCBI ID | WP_012514788.1 | Uniprot ID | B4U062 |
| Organism | Streptococcus equi subsp. zooepidemicus strain SEZ28 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 121029..131982
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I2436_RS00695 (GDAKBCAL_00139) | - | 121502..122170 (+) | 669 | WP_043052639.1 | ATP-binding cassette domain-containing protein | - |
| I2436_RS00700 (GDAKBCAL_00140) | comGA/cglA | 122327..123265 (+) | 939 | WP_164437804.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I2436_RS00705 (GDAKBCAL_00141) | comYB | 123198..124232 (+) | 1035 | WP_227687788.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| I2436_RS00710 (GDAKBCAL_00142) | comGC/cglC | 124233..124556 (+) | 324 | WP_206152868.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I2436_RS00715 (GDAKBCAL_00143) | comGD | 124534..124959 (+) | 426 | WP_206152869.1 | competence type IV pilus minor pilin ComGD | - |
| I2436_RS00720 (GDAKBCAL_00144) | comGE | 124916..125206 (+) | 291 | WP_014622143.1 | competence type IV pilus minor pilin ComGE | - |
| I2436_RS00725 (GDAKBCAL_00145) | comYF | 125193..125627 (+) | 435 | WP_037580631.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| I2436_RS00730 (GDAKBCAL_00146) | comGG | 125605..125967 (+) | 363 | WP_012514785.1 | competence type IV pilus minor pilin ComGG | - |
| I2436_RS00735 (GDAKBCAL_00147) | comYH | 126029..126982 (+) | 954 | WP_012514788.1 | class I SAM-dependent methyltransferase | Machinery gene |
| I2436_RS00740 (GDAKBCAL_00148) | - | 127042..128244 (+) | 1203 | WP_012514789.1 | acetate kinase | - |
| I2436_RS00745 (GDAKBCAL_00149) | - | 128616..129230 (-) | 615 | WP_021320266.1 | hypothetical protein | - |
| I2436_RS00750 (GDAKBCAL_00150) | - | 129753..131795 (+) | 2043 | WP_206152870.1 | BglG family transcription antiterminator | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35736.74 Da Isoelectric Point: 4.6973
>NTDB_id=506523 I2436_RS00735 WP_012514788.1 126029..126982(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain SEZ28]
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAQTILNHSHKSIDYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDLIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVVALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAQTILNHSHKSIDYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDLIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVVALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI
Nucleotide
Download Length: 954 bp
>NTDB_id=506523 I2436_RS00735 WP_012514788.1 126029..126982(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain SEZ28]
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGCCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGCTAACCAAGGAGGAGTGGCGTCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGTTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGAACAGGTAATCTAGCTCAAACTATTTTAAACCATTCACATAAGA
GCATTGATTATTTAGGCATTGAGCTTGATGATTTACTAATTGATCTATCAGCTAGTATCGCTGAAATCATGGGGTCATCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAAGAAAGTGATCTCATCATTAGCGATTTGCCAGTTGG
TTTTTATCCTAACGACGATATTGCTAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAAGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGTGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGCCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGCTAACCAAGGAGGAGTGGCGTCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGTTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGAACAGGTAATCTAGCTCAAACTATTTTAAACCATTCACATAAGA
GCATTGATTATTTAGGCATTGAGCTTGATGATTTACTAATTGATCTATCAGCTAGTATCGCTGAAATCATGGGGTCATCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAAGAAAGTGATCTCATCATTAGCGATTTGCCAGTTGG
TTTTTATCCTAACGACGATATTGCTAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAAGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGTGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
63.608 |
99.685 |
0.634 |
| comYH | Streptococcus mutans UA140 |
63.608 |
99.685 |
0.634 |