Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   H1R75_RS02235 Genome accession   NZ_CP059471
Coordinates   402451..402927 (+) Length   158 a.a.
NCBI ID   WP_182001570.1    Uniprot ID   -
Organism   Streptococcus equinus strain MDC1     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 397451..407927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1R75_RS02235 (H1R75_02235) comX/sigX 402451..402927 (+) 477 WP_182001570.1 sigma-70 family RNA polymerase sigma factor Regulator
  H1R75_RS02240 (H1R75_02240) - 402963..404321 (-) 1359 WP_021141679.1 aspartate kinase -
  H1R75_RS02245 (H1R75_02245) - 404422..405078 (+) 657 WP_033151962.1 HAD family hydrolase -
  H1R75_RS02250 (H1R75_02250) - 405261..406049 (+) 789 WP_024344588.1 enoyl-CoA hydratase -
  H1R75_RS02255 (H1R75_02255) - 406165..406599 (+) 435 WP_029876000.1 MarR family winged helix-turn-helix transcriptional regulator -
  H1R75_RS02260 (H1R75_02260) - 406602..407576 (+) 975 WP_024344590.1 beta-ketoacyl-ACP synthase III -
  H1R75_RS02265 (H1R75_02265) - 407635..407859 (+) 225 WP_003067534.1 acyl carrier protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 19314.13 Da        Isoelectric Point: 8.7333

>NTDB_id=469811 H1R75_RS02235 WP_182001570.1 402451..402927(+) (comX/sigX) [Streptococcus equinus strain MDC1]
MDFESYFETVKPIILKLRRHYFVKLWDYDDWIQEGRIVFFKLLQEHPEVLINEGRRYTYFKTKFSNHVKDTIRHQESFKR
KFNRMPYEEIGEISHCVPQVNFFEVADFIAYRDSLSQLKATLSLEEQEKLAKVVRGERFEGKKAFLRQIEPYFSDFKH

Nucleotide


Download         Length: 477 bp        

>NTDB_id=469811 H1R75_RS02235 WP_182001570.1 402451..402927(+) (comX/sigX) [Streptococcus equinus strain MDC1]
GTGGATTTTGAAAGCTATTTTGAAACTGTAAAACCAATTATTTTAAAATTAAGACGTCATTACTTTGTGAAATTATGGGA
TTATGACGACTGGATTCAGGAAGGGCGTATTGTCTTTTTCAAACTACTGCAAGAACATCCTGAGGTTCTGATTAATGAGG
GAAGACGCTATACTTACTTCAAGACAAAATTTTCTAATCATGTAAAGGATACCATCCGCCATCAGGAATCCTTTAAACGT
AAATTTAATCGTATGCCTTATGAAGAAATAGGTGAGATTAGTCATTGTGTGCCTCAGGTTAATTTTTTTGAAGTGGCAGA
CTTTATTGCTTACCGAGATAGTTTGTCTCAATTAAAAGCAACTTTAAGCTTAGAAGAGCAAGAAAAGCTAGCAAAAGTAG
TCAGAGGGGAACGATTTGAAGGGAAGAAAGCCTTCTTACGCCAAATTGAACCTTACTTTTCTGACTTTAAGCACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.