Detailed information NTG0442631

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: IUD19_RS09065
• Genome accession: NZ_CP064326
• Coordinates: 2030885..2032030 (+)
• Length: 381 a.a.
• NCBI ID: WP_194957615.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain Riv5
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2025885..2037030

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IUD19_RS09045 (IUD19_09045)	rsmB	2026674..2027963 (-)	1290	WP_004086443.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
IUD19_RS09050 (IUD19_09050)	fmt	2027960..2028883 (-)	924	WP_004086445.1	methionyl-tRNA formyltransferase	-
IUD19_RS09055 (IUD19_09055)	def	2028989..2029501 (-)	513	WP_004086447.1	peptide deformylase	-
IUD19_RS09060 (IUD19_09060)	-	2029640..2030794 (+)	1155	WP_004086450.1	LysM peptidoglycan-binding domain-containing protein	-
IUD19_RS09065 (IUD19_09065)	dprA	2030885..2032030 (+)	1146	WP_194957615.1	DNA-processing protein DprA	Machinery gene
IUD19_RS09070 (IUD19_09070)	-	2032076..2032549 (+)	474	WP_004089636.1	DUF494 family protein	-
IUD19_RS09075 (IUD19_09075)	-	2033521..2035968 (+)	2448	WP_004086454.1	DNA topoisomerase I	-
IUD19_RS09080 (IUD19_09080)	-	2036082..2036645 (+)	564	WP_021358455.1	Sua5/YciO/YrdC/YwlC family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40282.14 Da
• Isoelectric Point: 8.3549

>NTDB_id=442631 IUD19_RS09065 WP_194957615.1 2030885..2032030(+) (dprA) [Xylella fastidiosa subsp. multiplex strain Riv5]
MASPSHSDSQDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAAGPNAWRASGCNTMQCTRLVAPDPNAMARIQHWLATP
YHHLLGWHDPDYPPLLRHVPSPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGIISGMAAGIDA
TAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLHARITTDGAVISEYPPGTQPRAAHFPQRNRIIAGLALGTLVVEAGAL
SGALITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVATLAAPLAHTLRERLDAPSWPVAPLLS
TPNSKDPKYHTLWQALAHDPMSMDSLIGRTGLTAATLSSMLLTLELEGKVVVEHGRYTRTA

Nucleotide

• Length: 1146 bp

>NTDB_id=442631 IUD19_RS09065 WP_194957615.1 2030885..2032030(+) (dprA) [Xylella fastidiosa subsp. multiplex strain Riv5]
ATGGCATCCCCATCCCACTCAGACTCCCAAGACACGGACGCGCTGCTACGACTGGTCCTCGCCGGAGGCAGAAGCGCACC
GCGGCGCCAACTACTGGATTACCACGGCACGCCACACGCCGCATTGGCCGCCGGTCCAAATGCTTGGCGCGCCAGTGGCT
GTAACACAATGCAGTGCACCCGCCTAGTTGCTCCCGATCCCAATGCAATGGCACGCATACAACACTGGTTGGCAACGCCT
TACCATCACCTGCTCGGTTGGCACGATCCGGATTACCCGCCATTACTGCGTCATGTCCCTTCGCCACCCTTAGCATTGTT
CATCGCAGGGAATCCAATACTGCTATGGCACGCCAGTATTGCCATCGTCGGCAGCCGCCAGCCCAGTGCCGGCGGCCTTG
ATCATTCCTATGGCTTCGCACAGGCATTAGCGGCACGCGGCCTGGGCATCATCAGCGGAATGGCAGCCGGAATCGACGCC
ACAGCACACGAAGCCGCACTCAGCATACCCAGTGGGCATACGGTCGCAGTCCTTGGTACGGGCCCAGATGTGCCATACCC
AGCACGTCACAAAAAACTGCACGCACGTATCACCACAGACGGAGCGGTCATCAGCGAATATCCACCAGGAACCCAACCAC
GGGCTGCCCACTTTCCACAACGCAACAGGATTATTGCAGGCTTGGCGCTGGGCACACTGGTGGTCGAAGCTGGAGCGCTT
TCCGGCGCACTGATCACCGCTCGACTGGCAGCAGAAGCAGGGCGTGCTGTATTCGCAGTGCCAGGATCGCTACACAACCC
TATGACACGCGGCTGCCACCAGTTGATCCGTCAAGGCGCAACACTGGTTCAAGACATAGACCAAATATTGGAGGACGTCG
CTACGCTAGCAGCGCCGTTAGCACACACCTTGCGTGAGCGCCTTGATGCTCCCAGTTGGCCTGTAGCGCCATTATTAAGC
ACACCAAACAGTAAAGACCCTAAATACCACACACTTTGGCAGGCCCTTGCACATGACCCAATGTCCATGGACTCATTGAT
TGGCCGTACTGGATTGACGGCAGCCACACTCTCCTCCATGCTTCTAACCTTGGAACTGGAAGGAAAGGTTGTCGTAGAAC
ACGGACGTTATACACGTACCGCTTAG

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (321-375)

• DNA recombination-mediator protein A (DNA_processg_A) (83-284)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	41.176	89.239	0.367
dprA	Vibrio cholerae strain A1552	41.176	89.239	0.367
dprA	Acinetobacter baumannii D1279779	37.602	96.325	0.362