Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | HEP73_RS05530 | Genome accession | NZ_CP051189 |
| Coordinates | 1307537..1307929 (+) | Length | 130 a.a. |
| NCBI ID | WP_185822427.1 | Uniprot ID | A0A7G7STW7 |
| Organism | Xanthomonas sp. GW | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1302537..1312929
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HEP73_RS05510 (HEP73_01082) | - | 1302895..1304241 (+) | 1347 | WP_185822424.1 | HAMP domain-containing sensor histidine kinase | - |
| HEP73_RS05515 (HEP73_01083) | coaE | 1304388..1305008 (-) | 621 | WP_185822425.1 | dephospho-CoA kinase | - |
| HEP73_RS05520 (HEP73_01084) | - | 1305022..1305885 (-) | 864 | WP_046978035.1 | A24 family peptidase | - |
| HEP73_RS05525 (HEP73_01085) | pilC | 1305892..1307151 (-) | 1260 | WP_185822426.1 | type II secretion system F family protein | Machinery gene |
| HEP73_RS05530 (HEP73_01086) | pilA/pilAI | 1307537..1307929 (+) | 393 | WP_185822427.1 | pilin | Machinery gene |
| HEP73_RS05535 | - | 1308072..1308455 (+) | 384 | WP_276568899.1 | pilin | - |
| HEP73_RS05540 (HEP73_01087) | - | 1308508..1310349 (+) | 1842 | WP_185822428.1 | hypothetical protein | - |
| HEP73_RS05545 (HEP73_01088) | - | 1310612..1311778 (-) | 1167 | WP_185822429.1 | glycosyltransferase | - |
| HEP73_RS05550 (HEP73_01089) | - | 1311842..1312798 (-) | 957 | WP_185822430.1 | lysylphosphatidylglycerol synthase domain-containing protein | - |
Sequence
Protein
Download Length: 130 a.a. Molecular weight: 13728.94 Da Isoelectric Point: 8.1046
>NTDB_id=436729 HEP73_RS05530 WP_185822427.1 1307537..1307929(+) (pilA/pilAI) [Xanthomonas sp. GW]
MKKQQGFTLIELMIVVAIIAILAAIALPMYQDYVAKSQATAGLAEVTPGKTQFEVKKNDGSTLATPEQIGLQASTARCTI
SVTDTTIACALKGNASKIQGKIITLTRDDSGMWTCNGGDLEAKYKPTGCT
MKKQQGFTLIELMIVVAIIAILAAIALPMYQDYVAKSQATAGLAEVTPGKTQFEVKKNDGSTLATPEQIGLQASTARCTI
SVTDTTIACALKGNASKIQGKIITLTRDDSGMWTCNGGDLEAKYKPTGCT
Nucleotide
Download Length: 393 bp
>NTDB_id=436729 HEP73_RS05530 WP_185822427.1 1307537..1307929(+) (pilA/pilAI) [Xanthomonas sp. GW]
ATGAAGAAGCAGCAGGGCTTTACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGCCATCCTGGCGGCCATCGCGCT
GCCGATGTATCAGGACTATGTTGCCAAGTCGCAGGCGACCGCCGGTCTGGCCGAAGTTACTCCGGGCAAGACTCAGTTCG
AAGTCAAAAAGAACGATGGCAGCACTCTCGCTACGCCTGAACAGATTGGTCTGCAAGCCAGCACTGCACGCTGCACGATC
TCTGTAACTGATACCACTATCGCCTGCGCCCTGAAGGGTAATGCGAGCAAAATTCAGGGTAAGATCATTACCTTGACCCG
CGATGACAGCGGTATGTGGACTTGCAATGGCGGTGACTTGGAAGCCAAGTACAAGCCGACCGGTTGCACCTAA
ATGAAGAAGCAGCAGGGCTTTACCCTGATCGAACTGATGATCGTCGTCGCGATCATCGCCATCCTGGCGGCCATCGCGCT
GCCGATGTATCAGGACTATGTTGCCAAGTCGCAGGCGACCGCCGGTCTGGCCGAAGTTACTCCGGGCAAGACTCAGTTCG
AAGTCAAAAAGAACGATGGCAGCACTCTCGCTACGCCTGAACAGATTGGTCTGCAAGCCAGCACTGCACGCTGCACGATC
TCTGTAACTGATACCACTATCGCCTGCGCCCTGAAGGGTAATGCGAGCAAAATTCAGGGTAAGATCATTACCTTGACCCG
CGATGACAGCGGTATGTGGACTTGCAATGGCGGTGACTTGGAAGCCAAGTACAAGCCGACCGGTTGCACCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
53.333 |
100 |
0.554 |
| pilA | Acinetobacter baumannii strain A118 |
46.763 |
100 |
0.5 |
| pilA | Pseudomonas aeruginosa PAK |
43.333 |
100 |
0.5 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
46.617 |
100 |
0.477 |
| pilA | Vibrio cholerae C6706 |
41.667 |
100 |
0.462 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.667 |
100 |
0.462 |
| pilA | Vibrio cholerae strain A1552 |
41.667 |
100 |
0.462 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
35.404 |
100 |
0.438 |
| pilA/pilA1 | Eikenella corrodens VA1 |
37.748 |
100 |
0.438 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.58 |
100 |
0.431 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
42.636 |
99.231 |
0.423 |
| pilA2 | Legionella pneumophila str. Paris |
39.855 |
100 |
0.423 |
| comP | Acinetobacter baylyi ADP1 |
36.986 |
100 |
0.415 |