Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | GQA94_RS08040 | Genome accession | NZ_CP046902 |
| Coordinates | 1721452..1721895 (-) | Length | 147 a.a. |
| NCBI ID | WP_158187519.1 | Uniprot ID | A0A6I6LTF1 |
| Organism | Stutzerimonas stutzeri strain PM101005 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1716452..1726895
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQA94_RS08025 (GQA94_08025) | cysD | 1716463..1717380 (+) | 918 | WP_158187516.1 | sulfate adenylyltransferase subunit CysD | - |
| GQA94_RS08030 (GQA94_08030) | cysN | 1717393..1719291 (+) | 1899 | WP_158187517.1 | sulfate adenylyltransferase subunit CysN | - |
| GQA94_RS08035 (GQA94_08035) | - | 1719715..1721376 (-) | 1662 | WP_158187518.1 | O-antigen ligase family protein | - |
| GQA94_RS08040 (GQA94_08040) | pilA/pilAI | 1721452..1721895 (-) | 444 | WP_158187519.1 | pilin | Machinery gene |
| GQA94_RS08045 (GQA94_08045) | pilB | 1722120..1723823 (+) | 1704 | WP_158187520.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| GQA94_RS08050 (GQA94_08050) | pilC | 1723825..1725042 (+) | 1218 | WP_158187521.1 | type II secretion system F family protein | Machinery gene |
| GQA94_RS08055 (GQA94_08055) | pilD | 1725046..1725912 (+) | 867 | WP_158187522.1 | A24 family peptidase | Machinery gene |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 14875.06 Da Isoelectric Point: 7.5830
>NTDB_id=409225 GQA94_RS08040 WP_158187519.1 1721452..1721895(-) (pilA/pilAI) [Stutzerimonas stutzeri strain PM101005]
MKAQMQKGFTLIELMIVVAIIGILAAIAIPAYQDYVSKSKATAALADIAAGKTNYELLYTEKGAAAISGTATTIGLGVTT
GNCSSITITAPNATTGAATGAISCTINNPGRLGTGATISFDRTTDGLYECKVSSGIDAKYRPAGCEA
MKAQMQKGFTLIELMIVVAIIGILAAIAIPAYQDYVSKSKATAALADIAAGKTNYELLYTEKGAAAISGTATTIGLGVTT
GNCSSITITAPNATTGAATGAISCTINNPGRLGTGATISFDRTTDGLYECKVSSGIDAKYRPAGCEA
Nucleotide
Download Length: 444 bp
>NTDB_id=409225 GQA94_RS08040 WP_158187519.1 1721452..1721895(-) (pilA/pilAI) [Stutzerimonas stutzeri strain PM101005]
ATGAAAGCCCAGATGCAAAAAGGTTTTACTCTGATTGAACTGATGATCGTCGTCGCGATCATCGGCATTCTTGCCGCTAT
TGCTATTCCGGCTTATCAAGACTACGTCTCGAAATCTAAGGCAACAGCAGCCTTGGCAGATATTGCCGCCGGCAAAACCA
ACTATGAGCTTCTTTACACCGAAAAAGGTGCAGCAGCGATATCTGGCACAGCCACAACGATTGGCCTCGGCGTAACTACC
GGCAACTGTTCTTCAATCACAATTACTGCACCGAACGCCACCACCGGAGCGGCTACAGGAGCGATTTCCTGCACTATCAA
TAATCCGGGCCGCCTCGGCACCGGCGCCACCATTAGCTTTGATCGCACTACTGACGGTCTCTATGAGTGCAAAGTGAGCT
CAGGCATTGATGCAAAATATCGCCCAGCTGGCTGCGAAGCTTAA
ATGAAAGCCCAGATGCAAAAAGGTTTTACTCTGATTGAACTGATGATCGTCGTCGCGATCATCGGCATTCTTGCCGCTAT
TGCTATTCCGGCTTATCAAGACTACGTCTCGAAATCTAAGGCAACAGCAGCCTTGGCAGATATTGCCGCCGGCAAAACCA
ACTATGAGCTTCTTTACACCGAAAAAGGTGCAGCAGCGATATCTGGCACAGCCACAACGATTGGCCTCGGCGTAACTACC
GGCAACTGTTCTTCAATCACAATTACTGCACCGAACGCCACCACCGGAGCGGCTACAGGAGCGATTTCCTGCACTATCAA
TAATCCGGGCCGCCTCGGCACCGGCGCCACCATTAGCTTTGATCGCACTACTGACGGTCTCTATGAGTGCAAAGTGAGCT
CAGGCATTGATGCAAAATATCGCCCAGCTGGCTGCGAAGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
50 |
100 |
0.503 |
| pilA | Pseudomonas aeruginosa PAK |
43.791 |
100 |
0.456 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
46.479 |
96.599 |
0.449 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.282 |
100 |
0.429 |
| pilA | Vibrio cholerae strain A1552 |
42.282 |
100 |
0.429 |
| pilA | Vibrio cholerae C6706 |
42.282 |
100 |
0.429 |
| pilA | Acinetobacter baumannii strain A118 |
41.958 |
97.279 |
0.408 |
| pilA2 | Legionella pneumophila str. Paris |
40.268 |
100 |
0.408 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.268 |
100 |
0.408 |
| comP | Acinetobacter baylyi ADP1 |
39.073 |
100 |
0.401 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
34.706 |
100 |
0.401 |