Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   HUW68_RS11285 Genome accession   NZ_CP055225
Coordinates   2253577..2254047 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus LAC     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2248577..2259047
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUW68_RS11265 (HUW68_11270) coaW 2248886..2249689 (+) 804 WP_000862727.1 type II pantothenate kinase -
  HUW68_RS11270 (HUW68_11275) - 2249819..2250490 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  HUW68_RS11275 (HUW68_11280) ldmS 2250889..2252082 (-) 1194 WP_000183726.1 L-aspartate--L-methionine ligase LdmS -
  HUW68_RS11280 (HUW68_11285) - 2252082..2253266 (-) 1185 WP_001291500.1 M20 family metallopeptidase -
  HUW68_RS11285 (HUW68_11290) luxS 2253577..2254047 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  HUW68_RS11290 (HUW68_11295) - 2254199..2254549 (-) 351 WP_001024035.1 membrane protein -
  HUW68_RS11295 (HUW68_11300) - 2254563..2255864 (-) 1302 WP_001242318.1 pyrimidine-nucleoside phosphorylase -
  HUW68_RS11300 (HUW68_11305) deoC 2256143..2256805 (-) 663 WP_001083316.1 deoxyribose-phosphate aldolase -
  HUW68_RS11305 (HUW68_11310) deoD 2257120..2257830 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  HUW68_RS11310 (HUW68_11315) - 2257951..2258394 (-) 444 WP_000070866.1 Dps family protein -
  HUW68_RS11315 (HUW68_11320) - 2258594..2259007 (-) 414 WP_001123303.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=402782 HUW68_RS11285 WP_000164421.1 2253577..2254047(+) (luxS) [Staphylococcus aureus LAC]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=402782 HUW68_RS11285 WP_000164421.1 2253577..2254047(+) (luxS) [Staphylococcus aureus LAC]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAGGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404

Multiple sequence alignment