Detailed information NTG0400543

Bioinformatically predicted

Overview

• Name: comX/sigX/comX2/sigX2
• Type: Regulator
• Locus tag: GJS33_RS08490
• Genome accession: NZ_CP046041
• Coordinates: 1795843..1796322 (-)
• Length: 159 a.a.
• NCBI ID: WP_043053421.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain AZ-45470
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1796648..1798126	1795843..1796322	flank	326

Gene organization within MGE regions

Location: 1795843..1798126

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJS33_RS08490 (GJS33_08490)	comX/sigX/comX2/sigX2	1795843..1796322 (-)	480	WP_043053421.1	hypothetical protein	Regulator
GJS33_RS08500 (GJS33_08500)	-	1796648..1798044 (+)	1397	Protein_1656	ISNCY-like element ISSeq2 family transposase	-

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19146.10 Da
• Isoelectric Point: 8.2737

>NTDB_id=400543 GJS33_RS08490 WP_043053421.1 1795843..1796322(-) (comX/sigX/comX2/sigX2) [Streptococcus equi subsp. zooepidemicus strain AZ-45470]
MTDDLVRLFDKIKPIIMKLRRHYYIQLWELDDWLQEGRLILYRLLVTYPELIEDEEKLYRYFKTKFSSYLKDVLRQQESQ
KRRFHKMAYEEIGSVGHAIPAGGLGVDDYVAYQLIVKEVEERLTESELSQFRALIRGERFEGRRALLRKIGPYFQDFTG

Nucleotide

• Length: 480 bp

>NTDB_id=400543 GJS33_RS08490 WP_043053421.1 1795843..1796322(-) (comX/sigX/comX2/sigX2) [Streptococcus equi subsp. zooepidemicus strain AZ-45470]
ATGACTGATGATTTAGTGAGGTTATTTGATAAGATCAAGCCTATTATTATGAAGCTAAGACGGCATTATTATATTCAGCT
GTGGGAGCTAGATGATTGGTTACAGGAGGGGCGGTTGATCTTGTATCGGTTATTGGTCACTTATCCAGAATTGATAGAGG
ATGAGGAGAAGCTGTATCGTTATTTTAAGACCAAGTTTTCCTCTTATTTGAAGGACGTGTTGCGGCAGCAGGAGAGTCAG
AAGCGTCGGTTTCATAAGATGGCTTATGAGGAGATTGGGTCGGTAGGCCATGCGATACCAGCAGGTGGTTTGGGAGTAGA
TGATTATGTGGCTTATCAGTTGATTGTGAAGGAGGTTGAGGAGCGATTGACAGAGAGTGAGCTGTCGCAGTTTCGGGCTT
TGATCAGGGGAGAGCGGTTTGAGGGGAGACGGGCCTTGCTTCGCAAGATAGGACCTTACTTTCAGGATTTTACTGGCTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	68.354	99.371	0.679
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	68.354	99.371	0.679
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	68.354	99.371	0.679
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	68.354	99.371	0.679
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	68.354	99.371	0.679
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	68.354	99.371	0.679
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	47.742	97.484	0.465
comX/sigX	Streptococcus mutans UA159	46.497	98.742	0.459
comX	Streptococcus sobrinus strain NIDR 6715-7	45.752	96.226	0.44
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	40.667	94.34	0.384
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	40.397	94.969	0.384
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	40.397	94.969	0.384
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	39.333	94.34	0.371
comX/comX2	Streptococcus pneumoniae TIGR4	38.411	94.969	0.365
comX/comX1	Streptococcus pneumoniae TIGR4	38.411	94.969	0.365
comX/comX2	Streptococcus pneumoniae Rx1	38.411	94.969	0.365
comX/comX1	Streptococcus pneumoniae Rx1	38.411	94.969	0.365
comX/comX2	Streptococcus pneumoniae D39	38.411	94.969	0.365
comX/comX1	Streptococcus pneumoniae D39	38.411	94.969	0.365
comX/comX2	Streptococcus pneumoniae R6	38.411	94.969	0.365
comX/comX1	Streptococcus pneumoniae R6	38.411	94.969	0.365
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	38.667	94.34	0.365
comX	Streptococcus thermophilus LMG 18311	37.908	96.226	0.365
comX	Streptococcus thermophilus LMD-9	37.908	96.226	0.365