Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | DESPR_RS11640 | Genome accession | NC_014972 |
| Coordinates | 2665893..2666975 (-) | Length | 360 a.a. |
| NCBI ID | WP_015725010.1 | Uniprot ID | A0A7U4DPV9 |
| Organism | Desulfobulbus propionicus DSM 2032 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2660893..2671975
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DESPR_RS11625 (Despr_2326) | - | 2661423..2662757 (+) | 1335 | WP_015725007.1 | 3-deoxy-D-manno-octulosonic acid transferase | - |
| DESPR_RS11630 (Despr_2327) | - | 2662774..2665326 (+) | 2553 | WP_015725008.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| DESPR_RS11635 (Despr_2328) | - | 2665359..2665874 (+) | 516 | WP_015725009.1 | PilZ domain-containing protein | - |
| DESPR_RS11640 (Despr_2329) | pilT | 2665893..2666975 (-) | 1083 | WP_015725010.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| DESPR_RS11645 (Despr_2330) | - | 2667150..2669327 (-) | 2178 | WP_015725011.1 | tetratricopeptide repeat protein | - |
| DESPR_RS11650 (Despr_2331) | selA | 2669336..2670757 (-) | 1422 | WP_245529441.1 | L-seryl-tRNA(Sec) selenium transferase | - |
Sequence
Protein
Download Length: 360 a.a. Molecular weight: 40395.84 Da Isoelectric Point: 6.8916
>NTDB_id=39702 DESPR_RS11640 WP_015725010.1 2665893..2666975(-) (pilT) [Desulfobulbus propionicus DSM 2032]
MAQIDAFFKLMNDEGASDLHMMAGQQPVLRIRGDMERVKFKVLDNESLKAMLYEICPEDKIKIFEETGDMDFGYEIPGLA
RYRCNFFQQKYGIGAVFREIPSDILTCEQLGLPKVVSRLASLPKGLVLVTGPTGSGKSTTLAAILDECNKTRKDHILTVE
DPIEFVHKSQNCIVNHREVGTHTRSFSAALRGALREDPDIILVGEMRDLETIALAMEASMTGHLVFGTLHTMNAMKTVDR
VVEIFPANQQGQVRSTLADALRAVVSQTLFKRVDIKGRVAALEILICTPAVRNLIREGKTYQIPSIMQTGKKFGMQTLDD
AIFELLEKKKISAEDAYINCYEKGRFVKYLRHQPSDFTEI
MAQIDAFFKLMNDEGASDLHMMAGQQPVLRIRGDMERVKFKVLDNESLKAMLYEICPEDKIKIFEETGDMDFGYEIPGLA
RYRCNFFQQKYGIGAVFREIPSDILTCEQLGLPKVVSRLASLPKGLVLVTGPTGSGKSTTLAAILDECNKTRKDHILTVE
DPIEFVHKSQNCIVNHREVGTHTRSFSAALRGALREDPDIILVGEMRDLETIALAMEASMTGHLVFGTLHTMNAMKTVDR
VVEIFPANQQGQVRSTLADALRAVVSQTLFKRVDIKGRVAALEILICTPAVRNLIREGKTYQIPSIMQTGKKFGMQTLDD
AIFELLEKKKISAEDAYINCYEKGRFVKYLRHQPSDFTEI
Nucleotide
Download Length: 1083 bp
>NTDB_id=39702 DESPR_RS11640 WP_015725010.1 2665893..2666975(-) (pilT) [Desulfobulbus propionicus DSM 2032]
ATGGCCCAGATAGATGCATTTTTTAAGTTGATGAATGACGAAGGCGCCTCGGACCTGCACATGATGGCGGGGCAGCAGCC
GGTGCTCCGCATCCGCGGTGATATGGAGCGGGTCAAGTTCAAAGTGCTGGATAACGAAAGCCTCAAAGCGATGCTCTATG
AGATTTGTCCCGAGGACAAGATCAAGATCTTTGAAGAAACCGGGGATATGGATTTTGGCTACGAGATCCCTGGCCTGGCC
CGTTACCGCTGTAACTTTTTTCAGCAAAAGTATGGGATCGGTGCGGTATTCCGTGAAATTCCCAGCGACATTCTCACCTG
TGAACAGCTTGGTCTGCCCAAGGTGGTTTCTCGTTTGGCTTCCCTGCCAAAAGGCTTGGTGCTGGTGACCGGTCCCACTG
GTTCGGGAAAATCGACCACCTTGGCTGCCATTCTCGATGAATGCAACAAAACCCGCAAGGATCATATTCTCACCGTTGAG
GATCCCATCGAATTTGTGCATAAAAGCCAGAACTGCATCGTCAATCACCGCGAGGTGGGCACCCATACTCGCAGTTTTTC
GGCGGCCCTCCGTGGTGCCCTGCGTGAAGATCCCGATATCATCCTGGTCGGCGAGATGCGCGATCTGGAAACCATCGCCC
TGGCCATGGAGGCCTCAATGACCGGTCATCTGGTGTTCGGCACCCTTCACACCATGAATGCCATGAAAACCGTGGATCGT
GTGGTCGAGATTTTCCCCGCTAATCAGCAGGGGCAGGTGCGTTCCACCTTGGCGGACGCCTTGCGCGCGGTGGTGTCGCA
GACGCTGTTCAAGCGGGTTGACATCAAGGGGCGGGTCGCCGCCTTGGAAATTCTGATTTGCACACCAGCGGTTCGCAACC
TGATTCGTGAAGGGAAAACCTATCAGATTCCATCCATCATGCAAACCGGCAAGAAATTTGGCATGCAAACTTTGGATGAC
GCTATTTTTGAATTGCTGGAAAAAAAGAAGATCAGTGCCGAGGATGCGTATATCAACTGTTATGAAAAAGGCCGGTTTGT
GAAATATCTACGCCATCAACCTTCTGACTTTACTGAAATTTGA
ATGGCCCAGATAGATGCATTTTTTAAGTTGATGAATGACGAAGGCGCCTCGGACCTGCACATGATGGCGGGGCAGCAGCC
GGTGCTCCGCATCCGCGGTGATATGGAGCGGGTCAAGTTCAAAGTGCTGGATAACGAAAGCCTCAAAGCGATGCTCTATG
AGATTTGTCCCGAGGACAAGATCAAGATCTTTGAAGAAACCGGGGATATGGATTTTGGCTACGAGATCCCTGGCCTGGCC
CGTTACCGCTGTAACTTTTTTCAGCAAAAGTATGGGATCGGTGCGGTATTCCGTGAAATTCCCAGCGACATTCTCACCTG
TGAACAGCTTGGTCTGCCCAAGGTGGTTTCTCGTTTGGCTTCCCTGCCAAAAGGCTTGGTGCTGGTGACCGGTCCCACTG
GTTCGGGAAAATCGACCACCTTGGCTGCCATTCTCGATGAATGCAACAAAACCCGCAAGGATCATATTCTCACCGTTGAG
GATCCCATCGAATTTGTGCATAAAAGCCAGAACTGCATCGTCAATCACCGCGAGGTGGGCACCCATACTCGCAGTTTTTC
GGCGGCCCTCCGTGGTGCCCTGCGTGAAGATCCCGATATCATCCTGGTCGGCGAGATGCGCGATCTGGAAACCATCGCCC
TGGCCATGGAGGCCTCAATGACCGGTCATCTGGTGTTCGGCACCCTTCACACCATGAATGCCATGAAAACCGTGGATCGT
GTGGTCGAGATTTTCCCCGCTAATCAGCAGGGGCAGGTGCGTTCCACCTTGGCGGACGCCTTGCGCGCGGTGGTGTCGCA
GACGCTGTTCAAGCGGGTTGACATCAAGGGGCGGGTCGCCGCCTTGGAAATTCTGATTTGCACACCAGCGGTTCGCAACC
TGATTCGTGAAGGGAAAACCTATCAGATTCCATCCATCATGCAAACCGGCAAGAAATTTGGCATGCAAACTTTGGATGAC
GCTATTTTTGAATTGCTGGAAAAAAAGAAGATCAGTGCCGAGGATGCGTATATCAACTGTTATGAAAAAGGCCGGTTTGT
GAAATATCTACGCCATCAACCTTCTGACTTTACTGAAATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas stutzeri DSM 10701 |
57.895 |
89.722 |
0.519 |
| pilT | Pseudomonas aeruginosa PAK |
57.895 |
89.722 |
0.519 |
| pilT | Legionella pneumophila strain Lp02 |
54.985 |
91.944 |
0.506 |
| pilT | Legionella pneumophila strain ERS1305867 |
54.985 |
91.944 |
0.506 |
| pilT | Acinetobacter baylyi ADP1 |
55.521 |
88.056 |
0.489 |
| pilT | Acinetobacter baumannii strain A118 |
52.853 |
92.5 |
0.489 |
| pilT | Acinetobacter nosocomialis M2 |
52.853 |
92.5 |
0.489 |
| pilT | Acinetobacter baumannii D1279779 |
52.853 |
92.5 |
0.489 |
| pilT | Neisseria meningitidis 8013 |
51.198 |
92.778 |
0.475 |
| pilT | Neisseria gonorrhoeae MS11 |
52.336 |
89.167 |
0.467 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.68 |
94.722 |
0.461 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.467 |
89.167 |
0.45 |
| pilT | Vibrio cholerae strain A1552 |
50.467 |
89.167 |
0.45 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.645 |
93.889 |
0.372 |