Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ELI_RS18560 | Genome accession | NC_014624 |
| Coordinates | 3871677..3872726 (-) | Length | 349 a.a. |
| NCBI ID | WP_013382398.1 | Uniprot ID | A0A6N7WRK3 |
| Organism | Eubacterium callanderi | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3866677..3877726
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ELI_RS18550 (ELI_4147) | - | 3867201..3868481 (-) | 1281 | WP_013382396.1 | O-antigen ligase family protein | - |
| ELI_RS21185 (ELI_4148) | - | 3868542..3871658 (-) | 3117 | WP_013382397.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
| ELI_RS18560 (ELI_4149) | pilT | 3871677..3872726 (-) | 1050 | WP_013382398.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ELI_RS18565 (ELI_4150) | - | 3872747..3874423 (-) | 1677 | WP_013382399.1 | GspE/PulE family protein | - |
| ELI_RS18570 (ELI_4151) | - | 3874543..3875058 (-) | 516 | WP_013382400.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| ELI_RS18575 (ELI_4152) | - | 3875060..3876910 (-) | 1851 | WP_013382401.1 | diguanylate cyclase domain-containing protein | - |
| ELI_RS18580 (ELI_4153) | - | 3877232..3877654 (+) | 423 | WP_013382402.1 | Hsp20/alpha crystallin family protein | - |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 38556.07 Da Isoelectric Point: 6.0014
>NTDB_id=38717 ELI_RS18560 WP_013382398.1 3871677..3872726(-) (pilT) [Eubacterium callanderi]
MPTILDLIDYGRQTGCSDIHLTADLPPVFRSNGVLVKGPFEMSKREIGEMIIGMLSEMNREKIKRGEDADFTFVTPEGLR
QRVNVYRQQNELCAAVRLLNDTIPTFEELGLPPIIRKLAAEPRGLILITGPTGSGKSTTLAAMIDYINVNFAKHIITIED
PVEYRHYHKLSMIHQREVGVDVSSFADALRSSLREDPDVILVGEMRDYETISAAVTAAETGHLVLSTLHTIGAANTVDRI
IDVFPPHSQQQIRTQLASTLKGVVTQQLVPLASGEGRMAALEVMTGTDAVLNLIRENKTHQLSSAMQTGSRDGMNTLNSH
LAKLVKEGKIGFDTGLQWSSDKNEFNQYF
MPTILDLIDYGRQTGCSDIHLTADLPPVFRSNGVLVKGPFEMSKREIGEMIIGMLSEMNREKIKRGEDADFTFVTPEGLR
QRVNVYRQQNELCAAVRLLNDTIPTFEELGLPPIIRKLAAEPRGLILITGPTGSGKSTTLAAMIDYINVNFAKHIITIED
PVEYRHYHKLSMIHQREVGVDVSSFADALRSSLREDPDVILVGEMRDYETISAAVTAAETGHLVLSTLHTIGAANTVDRI
IDVFPPHSQQQIRTQLASTLKGVVTQQLVPLASGEGRMAALEVMTGTDAVLNLIRENKTHQLSSAMQTGSRDGMNTLNSH
LAKLVKEGKIGFDTGLQWSSDKNEFNQYF
Nucleotide
Download Length: 1050 bp
>NTDB_id=38717 ELI_RS18560 WP_013382398.1 3871677..3872726(-) (pilT) [Eubacterium callanderi]
ATGCCAACCATCTTAGACCTAATCGACTACGGCCGCCAGACTGGCTGTTCGGATATTCATTTGACGGCAGATCTGCCGCC
GGTATTCAGGAGCAACGGGGTGCTTGTCAAAGGCCCCTTTGAAATGAGCAAAAGGGAAATCGGAGAGATGATCATCGGGA
TGCTCAGTGAGATGAACCGTGAGAAAATCAAGCGGGGAGAGGACGCGGATTTTACTTTTGTCACGCCAGAGGGGCTCAGA
CAGAGGGTTAACGTGTACCGCCAGCAGAATGAGCTCTGCGCTGCCGTTCGCCTGCTCAACGACACCATTCCTACCTTTGA
GGAGCTGGGCCTGCCGCCCATTATCCGCAAGCTGGCCGCTGAGCCGAGAGGGCTGATCCTGATCACCGGGCCGACCGGGA
GTGGGAAATCCACCACACTGGCAGCTATGATCGACTACATCAACGTCAATTTTGCCAAGCATATCATCACCATTGAGGAC
CCGGTGGAATACCGCCATTACCATAAACTGAGCATGATCCACCAGCGTGAGGTGGGAGTGGATGTATCCTCCTTTGCCGA
CGCGCTGCGCTCATCCTTGCGTGAGGACCCCGACGTTATTCTGGTAGGGGAAATGCGTGACTACGAAACCATCTCGGCCG
CTGTAACCGCCGCTGAAACCGGGCATCTCGTGCTGTCTACTCTGCACACCATCGGTGCTGCCAACACGGTAGACCGTATT
ATCGACGTGTTCCCGCCCCACAGCCAGCAGCAGATACGGACACAGCTCGCCAGCACCCTGAAGGGTGTTGTGACACAGCA
GCTTGTGCCTCTGGCCTCCGGCGAAGGCCGGATGGCCGCCCTTGAGGTGATGACAGGCACCGACGCAGTGCTCAACCTTA
TCCGTGAAAACAAAACCCATCAGCTTTCCTCTGCCATGCAGACCGGCAGCCGGGACGGCATGAACACCCTGAACAGCCAC
CTGGCCAAGCTGGTGAAGGAAGGAAAGATCGGCTTTGATACCGGCCTCCAGTGGTCGTCAGACAAAAACGAGTTTAACCA
ATACTTTTAA
ATGCCAACCATCTTAGACCTAATCGACTACGGCCGCCAGACTGGCTGTTCGGATATTCATTTGACGGCAGATCTGCCGCC
GGTATTCAGGAGCAACGGGGTGCTTGTCAAAGGCCCCTTTGAAATGAGCAAAAGGGAAATCGGAGAGATGATCATCGGGA
TGCTCAGTGAGATGAACCGTGAGAAAATCAAGCGGGGAGAGGACGCGGATTTTACTTTTGTCACGCCAGAGGGGCTCAGA
CAGAGGGTTAACGTGTACCGCCAGCAGAATGAGCTCTGCGCTGCCGTTCGCCTGCTCAACGACACCATTCCTACCTTTGA
GGAGCTGGGCCTGCCGCCCATTATCCGCAAGCTGGCCGCTGAGCCGAGAGGGCTGATCCTGATCACCGGGCCGACCGGGA
GTGGGAAATCCACCACACTGGCAGCTATGATCGACTACATCAACGTCAATTTTGCCAAGCATATCATCACCATTGAGGAC
CCGGTGGAATACCGCCATTACCATAAACTGAGCATGATCCACCAGCGTGAGGTGGGAGTGGATGTATCCTCCTTTGCCGA
CGCGCTGCGCTCATCCTTGCGTGAGGACCCCGACGTTATTCTGGTAGGGGAAATGCGTGACTACGAAACCATCTCGGCCG
CTGTAACCGCCGCTGAAACCGGGCATCTCGTGCTGTCTACTCTGCACACCATCGGTGCTGCCAACACGGTAGACCGTATT
ATCGACGTGTTCCCGCCCCACAGCCAGCAGCAGATACGGACACAGCTCGCCAGCACCCTGAAGGGTGTTGTGACACAGCA
GCTTGTGCCTCTGGCCTCCGGCGAAGGCCGGATGGCCGCCCTTGAGGTGATGACAGGCACCGACGCAGTGCTCAACCTTA
TCCGTGAAAACAAAACCCATCAGCTTTCCTCTGCCATGCAGACCGGCAGCCGGGACGGCATGAACACCCTGAACAGCCAC
CTGGCCAAGCTGGTGAAGGAAGGAAAGATCGGCTTTGATACCGGCCTCCAGTGGTCGTCAGACAAAAACGAGTTTAACCA
ATACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.854 |
98.281 |
0.49 |
| pilT | Acinetobacter baylyi ADP1 |
46.356 |
98.281 |
0.456 |
| pilT | Neisseria meningitidis 8013 |
48.024 |
94.269 |
0.453 |
| pilT | Legionella pneumophila strain Lp02 |
45.507 |
98.854 |
0.45 |
| pilT | Legionella pneumophila strain ERS1305867 |
45.507 |
98.854 |
0.45 |
| pilT | Neisseria gonorrhoeae MS11 |
47.72 |
94.269 |
0.45 |
| pilT | Acinetobacter nosocomialis M2 |
44.898 |
98.281 |
0.441 |
| pilT | Acinetobacter baumannii D1279779 |
44.898 |
98.281 |
0.441 |
| pilT | Acinetobacter baumannii strain A118 |
44.898 |
98.281 |
0.441 |
| pilT | Pseudomonas aeruginosa PAK |
46.364 |
94.556 |
0.438 |
| pilT | Pseudomonas stutzeri DSM 10701 |
44.606 |
98.281 |
0.438 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
45.732 |
93.983 |
0.43 |
| pilT | Vibrio cholerae strain A1552 |
45.732 |
93.983 |
0.43 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.896 |
95.989 |
0.393 |