Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CYAN7822_RS08795 | Genome accession | NC_014501 |
| Coordinates | 1982238..1983356 (-) | Length | 372 a.a. |
| NCBI ID | WP_173362903.1 | Uniprot ID | - |
| Organism | Gloeothece verrucosa PCC 7822 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1977238..1988356
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYAN7822_RS08775 (Cyan7822_1799) | - | 1977401..1978402 (+) | 1002 | WP_013321892.1 | adenylate/guanylate cyclase domain-containing protein | - |
| CYAN7822_RS08780 (Cyan7822_1800) | lipB | 1978419..1979063 (-) | 645 | WP_013321893.1 | lipoyl(octanoyl) transferase LipB | - |
| CYAN7822_RS08785 (Cyan7822_1801) | raiA | 1979616..1980215 (+) | 600 | WP_013321894.1 | ribosome-associated translation inhibitor RaiA | - |
| CYAN7822_RS08790 (Cyan7822_1802) | - | 1980888..1982102 (-) | 1215 | WP_013321895.1 | type II secretion system F family protein | - |
| CYAN7822_RS08795 (Cyan7822_1803) | pilT | 1982238..1983356 (-) | 1119 | WP_173362903.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CYAN7822_RS08800 (Cyan7822_1804) | pilB/pilB1 | 1983457..1985487 (-) | 2031 | WP_013321897.1 | GspE/PulE family protein | Machinery gene |
| CYAN7822_RS08805 (Cyan7822_1805) | grpE | 1985728..1986591 (+) | 864 | WP_013321898.1 | nucleotide exchange factor GrpE | - |
Sequence
Protein
Download Length: 372 a.a. Molecular weight: 40972.25 Da Isoelectric Point: 6.6447
>NTDB_id=38379 CYAN7822_RS08795 WP_173362903.1 1982238..1983356(-) (pilT) [Gloeothece verrucosa PCC 7822]
MEVMIEDLMEQLVEMGGSDMHIQAGAPIYFRISGKLSPIDEEVLSPQDSQKLIFSMLNNTQRKELEQNWELDCSYGVKGL
ARFRVNVYKERGCYAACLRALSSKIPNFEQLALPDIVREMSERPRGLVLVTGQTGSGKTTTLAAILDLINRTRSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKCFANALRAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSAAGTID
RIIDVFPANQQAQIRAMLSNSLLAVFSQCLVKKKNPKPGEFGRAMAQEIMVITPAIANLIREGKAPQIYSSIQTGLKLGM
QTMEQALANFIINGVISFEEGMSKSGKPDELQRLVSGAQVGSGMNNKSKGRP
MEVMIEDLMEQLVEMGGSDMHIQAGAPIYFRISGKLSPIDEEVLSPQDSQKLIFSMLNNTQRKELEQNWELDCSYGVKGL
ARFRVNVYKERGCYAACLRALSSKIPNFEQLALPDIVREMSERPRGLVLVTGQTGSGKTTTLAAILDLINRTRSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKCFANALRAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSAAGTID
RIIDVFPANQQAQIRAMLSNSLLAVFSQCLVKKKNPKPGEFGRAMAQEIMVITPAIANLIREGKAPQIYSSIQTGLKLGM
QTMEQALANFIINGVISFEEGMSKSGKPDELQRLVSGAQVGSGMNNKSKGRP
Nucleotide
Download Length: 1119 bp
>NTDB_id=38379 CYAN7822_RS08795 WP_173362903.1 1982238..1983356(-) (pilT) [Gloeothece verrucosa PCC 7822]
ATAGAGGTGATGATTGAAGATTTAATGGAACAACTCGTGGAAATGGGGGGTTCTGATATGCACATTCAAGCGGGTGCGCC
TATTTACTTTCGGATCAGTGGAAAACTCAGCCCAATTGACGAAGAAGTTCTCTCTCCTCAAGACAGTCAAAAATTAATTT
TTAGTATGCTGAATAATACACAGCGTAAAGAGTTAGAGCAGAACTGGGAACTGGATTGTTCTTATGGGGTTAAGGGTTTA
GCCCGTTTTCGGGTGAATGTTTATAAAGAGCGGGGATGTTATGCCGCTTGTTTAAGGGCTTTGTCTTCTAAAATTCCTAA
TTTTGAACAGTTAGCTTTACCGGATATTGTTCGGGAAATGTCAGAAAGACCAAGAGGATTGGTGTTAGTGACTGGACAAA
CCGGCTCAGGTAAAACAACGACTTTAGCCGCTATTTTAGATTTAATTAATCGAACTCGTTCTGAACATATTTTAACGGTA
GAAGACCCGATAGAATATGTTTTTCCTAATATTAAAAGTTTATTTCATCAACGTCAAAAAGGAGAAGATACTAAGTGTTT
TGCCAATGCGCTCAGGGCCGCCTTACGGGAAGATCCGGATATTATTCTGGTAGGTGAAATGCGGGATTTAGAAACAATTT
CTTTGGCGATTTCAGCCGCCGAAACAGGGCACTTAGTTTTTGGAACCTTACATACCAGTTCAGCCGCCGGTACGATTGAC
CGGATTATTGATGTATTTCCCGCTAACCAACAAGCTCAAATCCGAGCCATGTTATCTAATTCTTTATTAGCTGTATTTAG
TCAATGTTTAGTCAAAAAGAAAAATCCTAAACCCGGCGAATTTGGACGAGCAATGGCTCAAGAAATCATGGTAATTACTC
CAGCAATTGCTAACTTGATTAGAGAGGGAAAAGCCCCTCAAATTTACTCATCTATTCAAACTGGGCTGAAATTAGGAATG
CAAACGATGGAGCAAGCGTTAGCGAATTTTATTATTAACGGAGTAATTTCTTTTGAAGAAGGAATGTCTAAGAGTGGTAA
ACCTGATGAATTACAACGCCTGGTGAGTGGGGCGCAAGTTGGGAGTGGTATGAACAATAAATCTAAAGGTCGGCCTTAA
ATAGAGGTGATGATTGAAGATTTAATGGAACAACTCGTGGAAATGGGGGGTTCTGATATGCACATTCAAGCGGGTGCGCC
TATTTACTTTCGGATCAGTGGAAAACTCAGCCCAATTGACGAAGAAGTTCTCTCTCCTCAAGACAGTCAAAAATTAATTT
TTAGTATGCTGAATAATACACAGCGTAAAGAGTTAGAGCAGAACTGGGAACTGGATTGTTCTTATGGGGTTAAGGGTTTA
GCCCGTTTTCGGGTGAATGTTTATAAAGAGCGGGGATGTTATGCCGCTTGTTTAAGGGCTTTGTCTTCTAAAATTCCTAA
TTTTGAACAGTTAGCTTTACCGGATATTGTTCGGGAAATGTCAGAAAGACCAAGAGGATTGGTGTTAGTGACTGGACAAA
CCGGCTCAGGTAAAACAACGACTTTAGCCGCTATTTTAGATTTAATTAATCGAACTCGTTCTGAACATATTTTAACGGTA
GAAGACCCGATAGAATATGTTTTTCCTAATATTAAAAGTTTATTTCATCAACGTCAAAAAGGAGAAGATACTAAGTGTTT
TGCCAATGCGCTCAGGGCCGCCTTACGGGAAGATCCGGATATTATTCTGGTAGGTGAAATGCGGGATTTAGAAACAATTT
CTTTGGCGATTTCAGCCGCCGAAACAGGGCACTTAGTTTTTGGAACCTTACATACCAGTTCAGCCGCCGGTACGATTGAC
CGGATTATTGATGTATTTCCCGCTAACCAACAAGCTCAAATCCGAGCCATGTTATCTAATTCTTTATTAGCTGTATTTAG
TCAATGTTTAGTCAAAAAGAAAAATCCTAAACCCGGCGAATTTGGACGAGCAATGGCTCAAGAAATCATGGTAATTACTC
CAGCAATTGCTAACTTGATTAGAGAGGGAAAAGCCCCTCAAATTTACTCATCTATTCAAACTGGGCTGAAATTAGGAATG
CAAACGATGGAGCAAGCGTTAGCGAATTTTATTATTAACGGAGTAATTTCTTTTGAAGAAGGAATGTCTAAGAGTGGTAA
ACCTGATGAATTACAACGCCTGGTGAGTGGGGCGCAAGTTGGGAGTGGTATGAACAATAAATCTAAAGGTCGGCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
54.054 |
89.516 |
0.484 |
| pilT | Legionella pneumophila strain Lp02 |
54.054 |
89.516 |
0.484 |
| pilT | Acinetobacter baylyi ADP1 |
51.297 |
93.28 |
0.478 |
| pilT | Acinetobacter nosocomialis M2 |
51.009 |
93.28 |
0.476 |
| pilT | Pseudomonas aeruginosa PAK |
51.009 |
93.28 |
0.476 |
| pilT | Acinetobacter baumannii D1279779 |
51.009 |
93.28 |
0.476 |
| pilT | Acinetobacter baumannii strain A118 |
51.009 |
93.28 |
0.476 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
51.613 |
91.667 |
0.473 |
| pilT | Vibrio cholerae strain A1552 |
51.613 |
91.667 |
0.473 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.432 |
93.28 |
0.47 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
46.196 |
98.925 |
0.457 |
| pilT | Neisseria meningitidis 8013 |
48.955 |
90.054 |
0.441 |
| pilT | Neisseria gonorrhoeae MS11 |
48.657 |
90.054 |
0.438 |