Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | AAZO_RS09350 | Genome accession | NC_014248 |
| Coordinates | 2050197..2051321 (-) | Length | 374 a.a. |
| NCBI ID | WP_013191064.1 | Uniprot ID | D7DWD0 |
| Organism | 'Nostoc azollae' 0708 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2045197..2056321
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAZO_RS29585 (Aazo_1965) | - | 2045582..2046547 (+) | 966 | Protein_2099 | IS701 family transposase | - |
| AAZO_RS09335 (Aazo_1966) | bioU | 2047123..2048118 (+) | 996 | WP_013191062.1 | (S)-8-amino-7-oxononanoate synthase BioU | - |
| AAZO_RS09340 (Aazo_1967) | - | 2048163..2048724 (-) | 562 | Protein_2101 | hypothetical protein | - |
| AAZO_RS09345 (Aazo_1968) | - | 2048836..2050059 (-) | 1224 | WP_013191063.1 | type II secretion system F family protein | - |
| AAZO_RS09350 (Aazo_1969) | pilT | 2050197..2051321 (-) | 1125 | WP_013191064.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| AAZO_RS09355 (Aazo_1971) | pilB/pilB1 | 2051434..2053446 (-) | 2013 | WP_013191066.1 | GspE/PulE family protein | Machinery gene |
| AAZO_RS35185 (Aazo_1972) | - | 2053852..2054004 (-) | 153 | WP_013191067.1 | hypothetical protein | - |
| AAZO_RS09360 (Aazo_1973) | grpE | 2054098..2054769 (+) | 672 | WP_013191068.1 | nucleotide exchange factor GrpE | - |
| AAZO_RS09365 (Aazo_1974) | - | 2055190..2055513 (+) | 324 | WP_013191069.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 374 a.a. Molecular weight: 40874.12 Da Isoelectric Point: 7.2086
>NTDB_id=37560 AAZO_RS09350 WP_013191064.1 2050197..2051321(-) (pilT) ['Nostoc azollae' 0708]
MEMIIEDLMEQLIDMGGSDLHLSAGLPPYFRVSGHLTPIGDHVLTADECQRLIFSMLNNTQRKTLEQTWELDCSYGVKGL
ARFRVNVYKERGAYAACLRALSSKIPNFEKLGLPNIVREMSEKPRGLILVTGPTGSGKTTTLAAMIDLINRTRAEHILTV
EDPVEFIYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIILVGEMRDLDTIALAISAAETGHLVFGTMHTSSAAQTVD
RIIDVFPHEKQTQVRVQLSNSLVAVFSQTLVSKKNPKPGEYGRVMAQEIMVITPAISNLIREGKTAQIYSAIQTGGKLGM
QTLEKVLADLYKAGTISFEATMSKTSKPDEVQRLIGSAPPQASAAKSGTAAKAH
MEMIIEDLMEQLIDMGGSDLHLSAGLPPYFRVSGHLTPIGDHVLTADECQRLIFSMLNNTQRKTLEQTWELDCSYGVKGL
ARFRVNVYKERGAYAACLRALSSKIPNFEKLGLPNIVREMSEKPRGLILVTGPTGSGKTTTLAAMIDLINRTRAEHILTV
EDPVEFIYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIILVGEMRDLDTIALAISAAETGHLVFGTMHTSSAAQTVD
RIIDVFPHEKQTQVRVQLSNSLVAVFSQTLVSKKNPKPGEYGRVMAQEIMVITPAISNLIREGKTAQIYSAIQTGGKLGM
QTLEKVLADLYKAGTISFEATMSKTSKPDEVQRLIGSAPPQASAAKSGTAAKAH
Nucleotide
Download Length: 1125 bp
>NTDB_id=37560 AAZO_RS09350 WP_013191064.1 2050197..2051321(-) (pilT) ['Nostoc azollae' 0708]
ATGGAAATGATCATTGAAGACTTGATGGAACAGTTGATTGACATGGGTGGTTCCGATCTGCACTTATCCGCAGGTTTACC
TCCCTACTTCCGCGTGAGTGGTCATCTGACTCCTATTGGTGATCATGTGCTGACTGCAGATGAATGCCAAAGATTAATTT
TTAGTATGCTCAATAACACCCAGCGAAAAACCTTAGAACAAACCTGGGAATTAGATTGTTCCTATGGTGTCAAAGGATTA
GCTCGTTTTCGGGTGAATGTCTACAAAGAACGTGGTGCTTATGCTGCTTGTTTGCGAGCATTGAGTTCTAAAATTCCTAA
CTTCGAAAAATTAGGTTTACCAAATATAGTTCGGGAAATGTCTGAAAAACCCAGAGGATTAATTCTGGTGACAGGCCCAA
CAGGTTCAGGTAAAACCACTACTCTAGCAGCAATGATTGACCTCATTAACCGCACTAGAGCAGAACATATTTTAACCGTT
GAAGACCCTGTAGAATTTATTTATGAACCAATTAAAAGCCTAGTTCACCAACGTCAACTAGGGGAAGACACCAAGAGTTT
TGCTAATGCCTTGAAAGCAGCTTTGCGGGAAGATCCAGATATCATTCTGGTAGGAGAAATGCGGGATTTGGACACAATTG
CTTTGGCAATTTCTGCCGCAGAAACAGGTCACTTAGTCTTTGGTACAATGCACACCAGTTCTGCTGCCCAAACAGTTGAC
CGGATCATCGACGTTTTCCCGCATGAAAAACAAACCCAAGTACGGGTACAATTATCAAATTCTTTAGTAGCAGTATTTAG
CCAAACTTTAGTATCTAAGAAAAATCCCAAACCAGGTGAATATGGTCGGGTGATGGCTCAAGAAATTATGGTAATCACTC
CTGCTATTTCCAACTTAATTCGTGAAGGTAAAACAGCGCAAATTTATTCAGCCATTCAAACTGGTGGTAAATTGGGAATG
CAAACTTTAGAGAAGGTTTTAGCTGATTTATATAAAGCTGGAACTATCTCTTTTGAAGCGACTATGTCTAAGACTTCTAA
GCCTGATGAAGTTCAACGTCTCATTGGGTCAGCACCACCACAAGCATCAGCAGCAAAATCTGGTACTGCTGCTAAAGCTC
ATTAG
ATGGAAATGATCATTGAAGACTTGATGGAACAGTTGATTGACATGGGTGGTTCCGATCTGCACTTATCCGCAGGTTTACC
TCCCTACTTCCGCGTGAGTGGTCATCTGACTCCTATTGGTGATCATGTGCTGACTGCAGATGAATGCCAAAGATTAATTT
TTAGTATGCTCAATAACACCCAGCGAAAAACCTTAGAACAAACCTGGGAATTAGATTGTTCCTATGGTGTCAAAGGATTA
GCTCGTTTTCGGGTGAATGTCTACAAAGAACGTGGTGCTTATGCTGCTTGTTTGCGAGCATTGAGTTCTAAAATTCCTAA
CTTCGAAAAATTAGGTTTACCAAATATAGTTCGGGAAATGTCTGAAAAACCCAGAGGATTAATTCTGGTGACAGGCCCAA
CAGGTTCAGGTAAAACCACTACTCTAGCAGCAATGATTGACCTCATTAACCGCACTAGAGCAGAACATATTTTAACCGTT
GAAGACCCTGTAGAATTTATTTATGAACCAATTAAAAGCCTAGTTCACCAACGTCAACTAGGGGAAGACACCAAGAGTTT
TGCTAATGCCTTGAAAGCAGCTTTGCGGGAAGATCCAGATATCATTCTGGTAGGAGAAATGCGGGATTTGGACACAATTG
CTTTGGCAATTTCTGCCGCAGAAACAGGTCACTTAGTCTTTGGTACAATGCACACCAGTTCTGCTGCCCAAACAGTTGAC
CGGATCATCGACGTTTTCCCGCATGAAAAACAAACCCAAGTACGGGTACAATTATCAAATTCTTTAGTAGCAGTATTTAG
CCAAACTTTAGTATCTAAGAAAAATCCCAAACCAGGTGAATATGGTCGGGTGATGGCTCAAGAAATTATGGTAATCACTC
CTGCTATTTCCAACTTAATTCGTGAAGGTAAAACAGCGCAAATTTATTCAGCCATTCAAACTGGTGGTAAATTGGGAATG
CAAACTTTAGAGAAGGTTTTAGCTGATTTATATAAAGCTGGAACTATCTCTTTTGAAGCGACTATGTCTAAGACTTCTAA
GCCTGATGAAGTTCAACGTCTCATTGGGTCAGCACCACCACAAGCATCAGCAGCAAAATCTGGTACTGCTGCTAAAGCTC
ATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
53.89 |
92.781 |
0.5 |
| pilT | Legionella pneumophila strain ERS1305867 |
53.314 |
92.781 |
0.495 |
| pilT | Legionella pneumophila strain Lp02 |
53.314 |
92.781 |
0.495 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.026 |
92.781 |
0.492 |
| pilT | Acinetobacter baylyi ADP1 |
53.026 |
92.781 |
0.492 |
| pilT | Acinetobacter baumannii D1279779 |
51.873 |
92.781 |
0.481 |
| pilT | Acinetobacter nosocomialis M2 |
51.873 |
92.781 |
0.481 |
| pilT | Acinetobacter baumannii strain A118 |
51.873 |
92.781 |
0.481 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.023 |
94.652 |
0.455 |
| pilT | Neisseria gonorrhoeae MS11 |
50.296 |
90.374 |
0.455 |
| pilT | Neisseria meningitidis 8013 |
50.148 |
90.107 |
0.452 |
| pilT | Vibrio cholerae strain A1552 |
49.123 |
91.444 |
0.449 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.123 |
91.444 |
0.449 |