Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | FH041_RS18745 | Genome accession | NZ_CP040930 |
| Coordinates | 4093273..4094268 (+) | Length | 331 a.a. |
| NCBI ID | WP_140174937.1 | Uniprot ID | - |
| Organism | Pseudomonas sp. SWI7 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4088273..4099268
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FH041_RS18715 (FH041_18715) | - | 4088755..4089189 (-) | 435 | WP_027913497.1 | DUF4426 domain-containing protein | - |
| FH041_RS18720 (FH041_18720) | metW | 4089208..4089828 (-) | 621 | WP_023532733.1 | methionine biosynthesis protein MetW | - |
| FH041_RS18725 (FH041_18725) | - | 4089836..4090975 (-) | 1140 | WP_028686690.1 | homoserine O-acetyltransferase | - |
| FH041_RS18730 (FH041_18730) | - | 4091064..4091654 (-) | 591 | WP_023532686.1 | YggT family protein | - |
| FH041_RS18735 (FH041_18735) | proC | 4091665..4092483 (-) | 819 | WP_027913499.1 | pyrroline-5-carboxylate reductase | - |
| FH041_RS18740 (FH041_18740) | - | 4092522..4093208 (-) | 687 | WP_111475148.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| FH041_RS18745 (FH041_18745) | pilT | 4093273..4094268 (+) | 996 | WP_140174937.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| FH041_RS18750 (FH041_18750) | - | 4094343..4094972 (-) | 630 | WP_140174940.1 | C40 family peptidase | - |
| FH041_RS18755 (FH041_18755) | - | 4095139..4095558 (+) | 420 | WP_023532338.1 | TM2 domain-containing protein | - |
| FH041_RS18760 (FH041_18760) | - | 4095615..4096313 (-) | 699 | WP_023532748.1 | SPOR domain-containing protein | - |
| FH041_RS18765 (FH041_18765) | argS | 4096315..4098051 (-) | 1737 | WP_027913503.1 | arginine--tRNA ligase | - |
Sequence
Protein
Download Length: 331 a.a. Molecular weight: 35544.21 Da Isoelectric Point: 7.1641
>NTDB_id=368382 FH041_RS18745 WP_140174937.1 4093273..4094268(+) (pilT) [Pseudomonas sp. SWI7]
MEVTDLLALALKAGASDMHLAAGQAPAMRVDGVLQRLPVPMATPDELMRSMESLLDADPYRQWAAGHDLDVALELPALGR
FRVNLFRQMNGPALTVRLIPARIACAEALGLGEIIRTTGRYRDGLVLIGGPTGSGKTSTLAALLDQMGRERALHIVTLED
PIEVVHASHQGVVNQREIGRDCCSFAQGLRSALRQDPDVIVLGELRDLETIRLALRAAETGHLVLATVHTRSAVNTVDRV
VEVFPAQEKPWVRAMLADSLRVVVAQVLVGRRGGGRVAAREVLVVNDAARNLIREGRMAQLHSVMQTGAAEGMQTLAGAM
KQLQAGGLLAE
MEVTDLLALALKAGASDMHLAAGQAPAMRVDGVLQRLPVPMATPDELMRSMESLLDADPYRQWAAGHDLDVALELPALGR
FRVNLFRQMNGPALTVRLIPARIACAEALGLGEIIRTTGRYRDGLVLIGGPTGSGKTSTLAALLDQMGRERALHIVTLED
PIEVVHASHQGVVNQREIGRDCCSFAQGLRSALRQDPDVIVLGELRDLETIRLALRAAETGHLVLATVHTRSAVNTVDRV
VEVFPAQEKPWVRAMLADSLRVVVAQVLVGRRGGGRVAAREVLVVNDAARNLIREGRMAQLHSVMQTGAAEGMQTLAGAM
KQLQAGGLLAE
Nucleotide
Download Length: 996 bp
>NTDB_id=368382 FH041_RS18745 WP_140174937.1 4093273..4094268(+) (pilT) [Pseudomonas sp. SWI7]
ATGGAGGTGACAGACCTGCTGGCGCTTGCCTTGAAGGCAGGTGCCAGTGACATGCACCTGGCTGCAGGTCAGGCGCCGGC
GATGCGCGTGGATGGCGTGCTGCAACGCCTGCCGGTACCGATGGCAACGCCGGATGAATTGATGCGAAGCATGGAATCGT
TGCTCGATGCCGACCCGTATCGACAGTGGGCTGCCGGTCACGACCTAGACGTGGCACTGGAGCTCCCCGCGCTCGGGCGG
TTTCGCGTGAACCTGTTCAGGCAGATGAACGGCCCCGCGCTCACTGTCCGCTTGATCCCCGCGCGCATCGCCTGCGCTGA
GGCGCTCGGCCTGGGCGAGATCATCCGAACCACTGGCCGATACCGTGACGGTCTGGTCCTCATAGGCGGGCCGACGGGCA
GTGGCAAGACGAGCACATTGGCAGCCCTGCTCGATCAGATGGGCCGCGAGCGTGCGCTGCACATCGTCACCCTCGAGGAT
CCGATCGAGGTCGTCCATGCCAGCCATCAAGGTGTGGTCAACCAGCGCGAAATCGGCCGCGATTGCTGCAGCTTTGCTCA
AGGCCTGCGCAGCGCATTGCGCCAGGACCCCGACGTGATCGTGCTGGGCGAGTTGAGGGACCTGGAGACCATTCGTCTTG
CACTGCGTGCCGCCGAAACGGGTCATCTGGTACTGGCAACCGTTCATACACGGTCAGCGGTGAACACTGTCGACCGGGTG
GTGGAGGTATTCCCAGCGCAGGAAAAGCCTTGGGTGCGCGCGATGCTGGCGGACTCGCTACGAGTGGTTGTGGCGCAAGT
GCTGGTCGGCCGGCGGGGCGGGGGCAGGGTCGCGGCGCGAGAAGTGCTGGTGGTGAACGATGCGGCCCGCAACCTGATCC
GCGAAGGGCGCATGGCCCAGCTTCATTCGGTGATGCAGACCGGCGCGGCAGAGGGCATGCAAACCCTGGCCGGGGCCATG
AAGCAACTTCAAGCGGGCGGGCTGCTCGCCGAGTGA
ATGGAGGTGACAGACCTGCTGGCGCTTGCCTTGAAGGCAGGTGCCAGTGACATGCACCTGGCTGCAGGTCAGGCGCCGGC
GATGCGCGTGGATGGCGTGCTGCAACGCCTGCCGGTACCGATGGCAACGCCGGATGAATTGATGCGAAGCATGGAATCGT
TGCTCGATGCCGACCCGTATCGACAGTGGGCTGCCGGTCACGACCTAGACGTGGCACTGGAGCTCCCCGCGCTCGGGCGG
TTTCGCGTGAACCTGTTCAGGCAGATGAACGGCCCCGCGCTCACTGTCCGCTTGATCCCCGCGCGCATCGCCTGCGCTGA
GGCGCTCGGCCTGGGCGAGATCATCCGAACCACTGGCCGATACCGTGACGGTCTGGTCCTCATAGGCGGGCCGACGGGCA
GTGGCAAGACGAGCACATTGGCAGCCCTGCTCGATCAGATGGGCCGCGAGCGTGCGCTGCACATCGTCACCCTCGAGGAT
CCGATCGAGGTCGTCCATGCCAGCCATCAAGGTGTGGTCAACCAGCGCGAAATCGGCCGCGATTGCTGCAGCTTTGCTCA
AGGCCTGCGCAGCGCATTGCGCCAGGACCCCGACGTGATCGTGCTGGGCGAGTTGAGGGACCTGGAGACCATTCGTCTTG
CACTGCGTGCCGCCGAAACGGGTCATCTGGTACTGGCAACCGTTCATACACGGTCAGCGGTGAACACTGTCGACCGGGTG
GTGGAGGTATTCCCAGCGCAGGAAAAGCCTTGGGTGCGCGCGATGCTGGCGGACTCGCTACGAGTGGTTGTGGCGCAAGT
GCTGGTCGGCCGGCGGGGCGGGGGCAGGGTCGCGGCGCGAGAAGTGCTGGTGGTGAACGATGCGGCCCGCAACCTGATCC
GCGAAGGGCGCATGGCCCAGCTTCATTCGGTGATGCAGACCGGCGCGGCAGAGGGCATGCAAACCCTGGCCGGGGCCATG
AAGCAACTTCAAGCGGGCGGGCTGCTCGCCGAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter baumannii D1279779 |
49.697 |
99.698 |
0.495 |
| pilT | Acinetobacter baumannii strain A118 |
49.697 |
99.698 |
0.495 |
| pilT | Acinetobacter baylyi ADP1 |
49.848 |
99.396 |
0.495 |
| pilT | Acinetobacter nosocomialis M2 |
49.394 |
99.698 |
0.492 |
| pilT | Pseudomonas stutzeri DSM 10701 |
49.091 |
99.698 |
0.489 |
| pilT | Pseudomonas aeruginosa PAK |
49.091 |
99.698 |
0.489 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
48.632 |
99.396 |
0.483 |
| pilT | Vibrio cholerae strain A1552 |
48.632 |
99.396 |
0.483 |
| pilT | Legionella pneumophila strain Lp02 |
46.828 |
100 |
0.468 |
| pilT | Legionella pneumophila strain ERS1305867 |
46.828 |
100 |
0.468 |
| pilT | Neisseria meningitidis 8013 |
46.828 |
100 |
0.468 |
| pilT | Neisseria gonorrhoeae MS11 |
46.526 |
100 |
0.465 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.849 |
95.77 |
0.42 |
| pilU | Pseudomonas stutzeri DSM 10701 |
37.462 |
100 |
0.375 |