Detailed information NTG0034160

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: SALIVB_RS00865
• Genome accession: NC_015760
• Coordinates: 144734..145231 (+)
• Length: 165 a.a.
• NCBI ID: WP_013989953.1
• Uniprot ID: -
• Organism: Streptococcus salivarius CCHSS3
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 139734..150231

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SALIVB_RS00860 (SALIVB_0167)	tnpA	144004..144420 (+)	417	WP_013989952.1	IS200/IS605 family transposase	-
SALIVB_RS00865 (SALIVB_0168)	comX/sigX	144734..145231 (+)	498	WP_013989953.1	sigma factor	Regulator
SALIVB_RS00870 (SALIVB_0169)	-	145340..146182 (-)	843	WP_041817181.1	mechanosensitive ion channel family protein	-
SALIVB_RS00875 (SALIVB_0170)	tig	146325..147608 (+)	1284	WP_013989955.1	trigger factor	-
SALIVB_RS00880 (SALIVB_0171)	rpoE	147766..148341 (+)	576	WP_002885605.1	DNA-directed RNA polymerase subunit delta	-
SALIVB_RS00885 (SALIVB_0172)	-	148594..150198 (+)	1605	WP_013989956.1	CTP synthase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19989.79 Da
• Isoelectric Point: 4.9953

>NTDB_id=34160 SALIVB_RS00865 WP_013989953.1 144734..145231(+) (comX/sigX) [Streptococcus salivarius CCHSS3]
MEQEIFVHAYEVVRPIVLKASRQYFIQLWDQADMEQEAMMTLYQLLEKFPELKSDDDKLRRYFKTKFRNRLNDEVRRQES
VKRQANRQCYIEISDIAFCLPNKELDAVDRLVYDEQLNAFRNQLSSEDATKLDRLLAGECFRGRKKMIRELKVWMVDFDP
YNEDD

Nucleotide

• Length: 498 bp

>NTDB_id=34160 SALIVB_RS00865 WP_013989953.1 144734..145231(+) (comX/sigX) [Streptococcus salivarius CCHSS3]
ATGGAACAAGAAATTTTTGTTCACGCATATGAAGTTGTAAGGCCGATTGTACTTAAGGCTAGTAGACAATATTTCATCCA
ACTTTGGGACCAAGCTGATATGGAGCAAGAGGCTATGATGACGCTTTATCAGCTTTTAGAAAAGTTTCCTGAATTAAAGT
CTGATGATGATAAGCTACGGCGTTATTTTAAAACGAAATTTAGGAATAGACTTAATGATGAGGTTAGAAGGCAGGAGTCT
GTAAAACGACAAGCTAATCGACAATGTTATATCGAAATTTCAGATATTGCTTTTTGTCTTCCGAATAAAGAGTTAGATGC
TGTTGATAGGCTTGTTTATGATGAGCAGCTTAATGCTTTCCGTAATCAGTTGTCTTCGGAAGATGCTACTAAGTTAGACC
GTTTGCTAGCTGGGGAGTGTTTTAGAGGTCGAAAAAAGATGATTCGAGAGTTAAAAGTTTGGATGGTTGATTTTGATCCT
TACAATGAAGATGATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus salivarius strain HSISS4	98.788	100	0.988
comX	Streptococcus salivarius SK126	98.182	100	0.982
comX	Streptococcus thermophilus LMD-9	87.879	100	0.879
comX	Streptococcus thermophilus LMG 18311	87.879	100	0.879
comX	Streptococcus sobrinus strain NIDR 6715-7	41.975	98.182	0.412
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	43.226	93.939	0.406
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	43.226	93.939	0.406
comX/sigX	Streptococcus mutans UA159	41.667	94.545	0.394
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	41.026	94.545	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	42.667	90.909	0.388
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	42.667	90.909	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	42.667	90.909	0.388
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	42.667	90.909	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	42	90.909	0.382
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	42	90.909	0.382
comX/sigX	Streptococcus suis D9	39.869	92.727	0.37
comX/sigX	Streptococcus suis isolate S10	39.869	92.727	0.37
comX/sigX	Streptococcus suis P1/7	39.869	92.727	0.37