Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | GLOV_RS15930 | Genome accession | NC_010814 |
| Coordinates | 3445857..3446927 (+) | Length | 356 a.a. |
| NCBI ID | WP_012471251.1 | Uniprot ID | - |
| Organism | Trichlorobacter lovleyi SZ | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3440857..3451927
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GLOV_RS15910 (Glov_3217) | fmt | 3441156..3442106 (+) | 951 | WP_012471247.1 | methionyl-tRNA formyltransferase | - |
| GLOV_RS15915 (Glov_3218) | - | 3442103..3442882 (+) | 780 | WP_012471248.1 | DUF116 domain-containing protein | - |
| GLOV_RS15920 (Glov_3219) | - | 3443040..3444041 (-) | 1002 | WP_012471249.1 | hypothetical protein | - |
| GLOV_RS15925 (Glov_3220) | - | 3444180..3445832 (+) | 1653 | WP_012471250.1 | hypothetical protein | - |
| GLOV_RS15930 (Glov_3221) | pilT | 3445857..3446927 (+) | 1071 | WP_012471251.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GLOV_RS15935 (Glov_3222) | - | 3447106..3448926 (-) | 1821 | WP_012471252.1 | KUP/HAK/KT family potassium transporter | - |
| GLOV_RS15940 (Glov_3223) | - | 3449077..3450114 (-) | 1038 | WP_012471253.1 | YhcG family protein | - |
| GLOV_RS19755 (Glov_3224) | - | 3450111..3450248 (-) | 138 | WP_012471254.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 39639.79 Da Isoelectric Point: 6.7806
>NTDB_id=31054 GLOV_RS15930 WP_012471251.1 3445857..3446927(+) (pilT) [Trichlorobacter lovleyi SZ]
MAKIDALFKMMKEQGASDLHLSSGNPPIFRQHGEMVRLQFKPLSHEELIPILYEILNDEQRAQFEATNDLDFAYAVPDLA
RFRGNIMMTHRGVAAVFRIIPATILSADQLNLPEGVRRMTQFKKGLVLVTGPTGSGKSTTLAALIDLINATRKEHILTLE
DPLEFIHENKQSLLNQRQIGAHTNSFASALRAALREDPDIILVGEMRDLETIQLAMSAAETGHLVFGTLHTNTAAKTIDR
IIDVFPKESQDQVRTMLSESLKGVVCQQLLKTADGHGRVAALEIMLGTPAIANLIREGKTFQIPSIIQTAKKDGMQLMDQ
HLLDLLKTRQINPEEAHRCAIDKKQFEQYLPQTPAT
MAKIDALFKMMKEQGASDLHLSSGNPPIFRQHGEMVRLQFKPLSHEELIPILYEILNDEQRAQFEATNDLDFAYAVPDLA
RFRGNIMMTHRGVAAVFRIIPATILSADQLNLPEGVRRMTQFKKGLVLVTGPTGSGKSTTLAALIDLINATRKEHILTLE
DPLEFIHENKQSLLNQRQIGAHTNSFASALRAALREDPDIILVGEMRDLETIQLAMSAAETGHLVFGTLHTNTAAKTIDR
IIDVFPKESQDQVRTMLSESLKGVVCQQLLKTADGHGRVAALEIMLGTPAIANLIREGKTFQIPSIIQTAKKDGMQLMDQ
HLLDLLKTRQINPEEAHRCAIDKKQFEQYLPQTPAT
Nucleotide
Download Length: 1071 bp
>NTDB_id=31054 GLOV_RS15930 WP_012471251.1 3445857..3446927(+) (pilT) [Trichlorobacter lovleyi SZ]
ATGGCTAAAATAGATGCACTGTTCAAGATGATGAAAGAACAGGGGGCTTCAGACCTGCACCTCTCATCCGGCAACCCACC
CATCTTCCGCCAGCATGGCGAGATGGTCCGGCTGCAGTTCAAACCGCTCTCCCACGAAGAGTTGATCCCGATCCTGTATG
AGATCCTCAATGATGAGCAGCGGGCCCAGTTCGAGGCCACCAACGACCTGGACTTTGCCTACGCCGTACCGGATCTGGCC
CGTTTCCGTGGCAACATCATGATGACCCACCGTGGCGTGGCAGCGGTCTTCAGGATCATCCCGGCTACGATCCTCTCGGC
AGACCAGCTGAACCTGCCGGAAGGGGTGCGGCGGATGACCCAGTTCAAAAAGGGGCTGGTACTGGTGACCGGCCCGACCG
GTTCCGGTAAATCCACCACCCTGGCAGCTCTGATCGATCTGATCAATGCCACCCGCAAGGAACATATCCTGACCCTGGAA
GACCCGCTGGAGTTCATCCATGAAAACAAACAATCGCTCTTGAACCAGCGTCAGATCGGGGCGCACACCAACTCGTTCGC
CTCGGCCCTGCGGGCCGCCCTGCGGGAAGACCCGGACATCATCCTGGTGGGAGAGATGCGGGATCTGGAGACGATCCAGC
TGGCCATGAGCGCTGCCGAGACCGGTCACCTGGTCTTCGGCACCCTGCACACCAACACCGCAGCCAAGACCATTGACCGG
ATCATTGATGTCTTTCCGAAGGAATCACAGGATCAGGTTCGCACCATGCTGTCGGAATCGCTCAAGGGGGTGGTCTGCCA
GCAACTGCTCAAGACTGCTGATGGTCACGGACGGGTGGCAGCCCTGGAGATCATGCTGGGTACCCCGGCCATTGCCAACC
TGATCCGCGAAGGCAAGACCTTCCAGATCCCCTCCATCATCCAGACCGCCAAGAAAGACGGCATGCAGCTGATGGACCAA
CACCTGCTGGATCTGCTCAAGACCAGGCAGATCAACCCGGAAGAGGCCCACCGCTGTGCCATTGACAAGAAACAGTTTGA
ACAGTACCTGCCTCAGACACCTGCGACATAG
ATGGCTAAAATAGATGCACTGTTCAAGATGATGAAAGAACAGGGGGCTTCAGACCTGCACCTCTCATCCGGCAACCCACC
CATCTTCCGCCAGCATGGCGAGATGGTCCGGCTGCAGTTCAAACCGCTCTCCCACGAAGAGTTGATCCCGATCCTGTATG
AGATCCTCAATGATGAGCAGCGGGCCCAGTTCGAGGCCACCAACGACCTGGACTTTGCCTACGCCGTACCGGATCTGGCC
CGTTTCCGTGGCAACATCATGATGACCCACCGTGGCGTGGCAGCGGTCTTCAGGATCATCCCGGCTACGATCCTCTCGGC
AGACCAGCTGAACCTGCCGGAAGGGGTGCGGCGGATGACCCAGTTCAAAAAGGGGCTGGTACTGGTGACCGGCCCGACCG
GTTCCGGTAAATCCACCACCCTGGCAGCTCTGATCGATCTGATCAATGCCACCCGCAAGGAACATATCCTGACCCTGGAA
GACCCGCTGGAGTTCATCCATGAAAACAAACAATCGCTCTTGAACCAGCGTCAGATCGGGGCGCACACCAACTCGTTCGC
CTCGGCCCTGCGGGCCGCCCTGCGGGAAGACCCGGACATCATCCTGGTGGGAGAGATGCGGGATCTGGAGACGATCCAGC
TGGCCATGAGCGCTGCCGAGACCGGTCACCTGGTCTTCGGCACCCTGCACACCAACACCGCAGCCAAGACCATTGACCGG
ATCATTGATGTCTTTCCGAAGGAATCACAGGATCAGGTTCGCACCATGCTGTCGGAATCGCTCAAGGGGGTGGTCTGCCA
GCAACTGCTCAAGACTGCTGATGGTCACGGACGGGTGGCAGCCCTGGAGATCATGCTGGGTACCCCGGCCATTGCCAACC
TGATCCGCGAAGGCAAGACCTTCCAGATCCCCTCCATCATCCAGACCGCCAAGAAAGACGGCATGCAGCTGATGGACCAA
CACCTGCTGGATCTGCTCAAGACCAGGCAGATCAACCCGGAAGAGGCCCACCGCTGTGCCATTGACAAGAAACAGTTTGA
ACAGTACCTGCCTCAGACACCTGCGACATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
58.61 |
92.978 |
0.545 |
| pilT | Legionella pneumophila strain Lp02 |
58.61 |
92.978 |
0.545 |
| pilT | Acinetobacter baylyi ADP1 |
56.268 |
96.348 |
0.542 |
| pilT | Acinetobacter baumannii strain A118 |
54.467 |
97.472 |
0.531 |
| pilT | Acinetobacter nosocomialis M2 |
54.467 |
97.472 |
0.531 |
| pilT | Acinetobacter baumannii D1279779 |
54.467 |
97.472 |
0.531 |
| pilT | Pseudomonas stutzeri DSM 10701 |
55.102 |
96.348 |
0.531 |
| pilT | Pseudomonas aeruginosa PAK |
55.49 |
94.663 |
0.525 |
| pilT | Neisseria meningitidis 8013 |
55.03 |
94.944 |
0.522 |
| pilT | Neisseria gonorrhoeae MS11 |
55.03 |
94.944 |
0.522 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
52.907 |
96.629 |
0.511 |
| pilT | Vibrio cholerae strain A1552 |
52.907 |
96.629 |
0.511 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.014 |
96.91 |
0.494 |
| pilU | Vibrio cholerae strain A1552 |
41.433 |
90.169 |
0.374 |