Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | C7I86_RS10420 | Genome accession | NZ_CP028094 |
| Coordinates | 2203785..2204894 (+) | Length | 369 a.a. |
| NCBI ID | WP_010873187.1 | Uniprot ID | - |
| Organism | Synechocystis sp. IPPAS B-1465 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2198785..2209894
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7I86_RS10415 (C7I86_10395) | - | 2201988..2203391 (-) | 1404 | WP_010873186.1 | efflux RND transporter periplasmic adaptor subunit | - |
| C7I86_RS10420 (C7I86_10400) | pilT | 2203785..2204894 (+) | 1110 | WP_010873187.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| C7I86_RS10425 (C7I86_10405) | - | 2204998..2206212 (+) | 1215 | WP_014407124.1 | type II secretion system F family protein | - |
| C7I86_RS10430 (C7I86_10410) | - | 2206614..2207291 (+) | 678 | WP_010873190.1 | ATP-dependent Clp protease proteolytic subunit | - |
| C7I86_RS10435 (C7I86_10415) | - | 2207391..2207999 (+) | 609 | WP_010873191.1 | ATP-dependent Clp protease proteolytic subunit | - |
| C7I86_RS10440 (C7I86_10420) | - | 2208210..2209535 (-) | 1326 | WP_010873192.1 | aminopeptidase P N-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 369 a.a. Molecular weight: 40615.94 Da Isoelectric Point: 6.9682
>NTDB_id=281180 C7I86_RS10420 WP_010873187.1 2203785..2204894(+) (pilT) [Synechocystis sp. IPPAS B-1465]
MALEYMIEDLMEQLVEMGGSDMHIQAGAPVYFRVSGKLEPINEEVLTPQESQKLIFSMLNNSQRKELEQNWELDCSYGVK
GLARFRINVYKERGCYAACLRALSSKIPNFEQLGLPNIVREMAERPRGLILVTGQTGSGKTTTLAAILDLINRTRAEHIL
TIEDPIEYVFPNVRSLFHQRQRGEDTKSFSNALRAALREDPDIVLVGELRDLETIALAITAAETGHLVFGTLHTNSAAGT
IDRMLDVFPANQQAQIRAMLSNSLLAVFAQNLVKKKSPKPGEFGRALVQEIMVITPAIANLIREGKAAQIYSAIQTGAKL
GMQTMEQGLATLVVSGVISLEEGLAKSGKPDELQRLIGGMTPQVAAKRR
MALEYMIEDLMEQLVEMGGSDMHIQAGAPVYFRVSGKLEPINEEVLTPQESQKLIFSMLNNSQRKELEQNWELDCSYGVK
GLARFRINVYKERGCYAACLRALSSKIPNFEQLGLPNIVREMAERPRGLILVTGQTGSGKTTTLAAILDLINRTRAEHIL
TIEDPIEYVFPNVRSLFHQRQRGEDTKSFSNALRAALREDPDIVLVGELRDLETIALAITAAETGHLVFGTLHTNSAAGT
IDRMLDVFPANQQAQIRAMLSNSLLAVFAQNLVKKKSPKPGEFGRALVQEIMVITPAIANLIREGKAAQIYSAIQTGAKL
GMQTMEQGLATLVVSGVISLEEGLAKSGKPDELQRLIGGMTPQVAAKRR
Nucleotide
Download Length: 1110 bp
>NTDB_id=281180 C7I86_RS10420 WP_010873187.1 2203785..2204894(+) (pilT) [Synechocystis sp. IPPAS B-1465]
ATGGCTTTGGAATACATGATCGAAGACCTCATGGAGCAGTTGGTGGAAATGGGCGGCTCCGATATGCACATTCAAGCGGG
GGCACCGGTTTATTTCCGGGTGAGCGGCAAATTAGAACCGATTAACGAGGAAGTTTTAACTCCCCAGGAAAGCCAAAAGT
TAATCTTCAGCATGCTGAACAATTCCCAACGGAAAGAACTAGAACAAAATTGGGAATTGGACTGTTCCTATGGCGTGAAA
GGTTTAGCTCGTTTCCGGATTAACGTTTACAAAGAACGGGGTTGTTATGCCGCCTGTTTACGGGCCCTTTCTTCTAAAAT
TCCCAACTTTGAACAATTGGGACTGCCCAACATTGTGCGGGAAATGGCGGAACGCCCCCGGGGACTAATTCTAGTGACGG
GACAAACTGGCTCCGGTAAAACCACCACTTTGGCAGCAATTTTAGACTTAATTAACCGCACCAGGGCCGAACATATTCTC
ACCATCGAAGATCCGATCGAGTATGTGTTTCCCAACGTGCGCAGTCTTTTTCACCAGCGGCAACGGGGGGAAGATACGAA
AAGTTTCTCCAATGCTCTGCGGGCAGCGTTACGGGAAGATCCGGACATTGTACTGGTGGGAGAATTGCGGGATTTGGAAA
CCATTGCCCTTGCCATCACTGCGGCAGAAACCGGACACTTGGTTTTTGGCACTCTCCACACCAACTCAGCAGCGGGCACC
ATTGACCGGATGTTGGATGTGTTTCCGGCTAACCAACAGGCCCAAATTAGAGCCATGTTATCCAACTCTTTACTAGCGGT
ATTTGCCCAAAACTTAGTCAAGAAAAAGTCCCCCAAACCCGGGGAGTTTGGCCGGGCCCTAGTGCAGGAAATTATGGTCA
TTACCCCGGCGATCGCCAACCTAATTCGGGAAGGCAAAGCGGCCCAGATTTATTCCGCCATTCAAACCGGAGCAAAACTA
GGTATGCAGACCATGGAACAGGGCCTGGCCACGTTGGTGGTGTCGGGGGTAATTTCCCTGGAAGAAGGTTTAGCTAAGAG
TGGTAAGCCGGACGAGCTACAGCGCTTAATCGGTGGCATGACCCCCCAGGTTGCCGCTAAACGTCGTTAG
ATGGCTTTGGAATACATGATCGAAGACCTCATGGAGCAGTTGGTGGAAATGGGCGGCTCCGATATGCACATTCAAGCGGG
GGCACCGGTTTATTTCCGGGTGAGCGGCAAATTAGAACCGATTAACGAGGAAGTTTTAACTCCCCAGGAAAGCCAAAAGT
TAATCTTCAGCATGCTGAACAATTCCCAACGGAAAGAACTAGAACAAAATTGGGAATTGGACTGTTCCTATGGCGTGAAA
GGTTTAGCTCGTTTCCGGATTAACGTTTACAAAGAACGGGGTTGTTATGCCGCCTGTTTACGGGCCCTTTCTTCTAAAAT
TCCCAACTTTGAACAATTGGGACTGCCCAACATTGTGCGGGAAATGGCGGAACGCCCCCGGGGACTAATTCTAGTGACGG
GACAAACTGGCTCCGGTAAAACCACCACTTTGGCAGCAATTTTAGACTTAATTAACCGCACCAGGGCCGAACATATTCTC
ACCATCGAAGATCCGATCGAGTATGTGTTTCCCAACGTGCGCAGTCTTTTTCACCAGCGGCAACGGGGGGAAGATACGAA
AAGTTTCTCCAATGCTCTGCGGGCAGCGTTACGGGAAGATCCGGACATTGTACTGGTGGGAGAATTGCGGGATTTGGAAA
CCATTGCCCTTGCCATCACTGCGGCAGAAACCGGACACTTGGTTTTTGGCACTCTCCACACCAACTCAGCAGCGGGCACC
ATTGACCGGATGTTGGATGTGTTTCCGGCTAACCAACAGGCCCAAATTAGAGCCATGTTATCCAACTCTTTACTAGCGGT
ATTTGCCCAAAACTTAGTCAAGAAAAAGTCCCCCAAACCCGGGGAGTTTGGCCGGGCCCTAGTGCAGGAAATTATGGTCA
TTACCCCGGCGATCGCCAACCTAATTCGGGAAGGCAAAGCGGCCCAGATTTATTCCGCCATTCAAACCGGAGCAAAACTA
GGTATGCAGACCATGGAACAGGGCCTGGCCACGTTGGTGGTGTCGGGGGTAATTTCCCTGGAAGAAGGTTTAGCTAAGAG
TGGTAAGCCGGACGAGCTACAGCGCTTAATCGGTGGCATGACCCCCCAGGTTGCCGCTAAACGTCGTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain Lp02 |
54.655 |
90.244 |
0.493 |
| pilT | Legionella pneumophila strain ERS1305867 |
54.655 |
90.244 |
0.493 |
| pilT | Pseudomonas aeruginosa PAK |
51.585 |
94.038 |
0.485 |
| pilT | Acinetobacter baylyi ADP1 |
51.009 |
94.038 |
0.48 |
| pilT | Acinetobacter nosocomialis M2 |
50.72 |
94.038 |
0.477 |
| pilT | Acinetobacter baumannii strain A118 |
50.72 |
94.038 |
0.477 |
| pilT | Acinetobacter baumannii D1279779 |
50.72 |
94.038 |
0.477 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.432 |
94.038 |
0.474 |
| pilT | Vibrio cholerae strain A1552 |
51.026 |
92.412 |
0.472 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
51.026 |
92.412 |
0.472 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
47.397 |
98.916 |
0.469 |
| pilT | Neisseria meningitidis 8013 |
49.254 |
90.786 |
0.447 |
| pilT | Neisseria gonorrhoeae MS11 |
48.955 |
90.786 |
0.444 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.177 |
95.122 |
0.363 |