Detailed information NTG0256910

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: CVO91_RS00925
• Genome accession: NZ_CP024974
• Coordinates: 142421..142702 (+)
• Length: 93 a.a.
• NCBI ID: WP_024377792.1
• Uniprot ID: -
• Organism: Streptococcus suis strain CZ130302
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 137421..147702

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CVO91_RS00900 (CVO91_00900)	-	137602..138858 (-)	1257	WP_100664708.1	ISL3 family transposase	-
CVO91_RS00905 (CVO91_00905)	-	139084..139449 (+)	366	WP_004195575.1	DUF1033 family protein	-
CVO91_RS00910 (CVO91_00910)	-	139484..140434 (-)	951	WP_100664709.1	S66 peptidase family protein	-
CVO91_RS00915 (CVO91_00915)	comYA	140520..141470 (+)	951	WP_100664710.1	competence type IV pilus ATPase ComGA	Machinery gene
CVO91_RS00920 (CVO91_00920)	comYB	141382..142419 (+)	1038	WP_050572090.1	competence type IV pilus assembly protein ComGB	Machinery gene
CVO91_RS00925 (CVO91_00925)	comYC	142421..142702 (+)	282	WP_024377792.1	competence type IV pilus major pilin ComGC	Machinery gene
CVO91_RS00930 (CVO91_00930)	comGD	142683..143090 (+)	408	WP_100664711.1	competence type IV pilus minor pilin ComGD	-
CVO91_RS00935 (CVO91_00935)	comYE	143062..143355 (+)	294	WP_044765771.1	competence type IV pilus minor pilin ComGE	Machinery gene
CVO91_RS00940 (CVO91_00940)	comGF/cglF	143342..143776 (+)	435	WP_100664712.1	competence type IV pilus minor pilin ComGF	Machinery gene
CVO91_RS00945 (CVO91_00945)	comGG	143754..144266 (+)	513	WP_100664713.1	competence type IV pilus minor pilin ComGG	-
CVO91_RS00950 (CVO91_00950)	-	144494..146575 (+)	2082	WP_100664714.1	GBS Bsp-like repeat-containing protein	-

Sequence

Protein

• Length: 93 a.a.
• Molecular weight: 10495.54 Da
• Isoelectric Point: 9.9321

>NTDB_id=256910 CVO91_RS00925 WP_024377792.1 142421..142702(+) (comYC) [Streptococcus suis strain CZ130302]
MKKLLKLKKKAFTLVEMLVVLGIISLLLLIFVPNLSQQKDAIQKKGNAAVIKVVESQMELYELEHHKEATVADLQADGYI
TEKQAEQYAKAKK

Nucleotide

• Length: 282 bp

>NTDB_id=256910 CVO91_RS00925 WP_024377792.1 142421..142702(+) (comYC) [Streptococcus suis strain CZ130302]
ATGAAAAAATTGTTGAAATTAAAAAAGAAAGCTTTCACTCTGGTGGAAATGTTAGTTGTTTTGGGTATTATTAGTCTGCT
CTTGCTCATTTTTGTGCCAAATTTGAGCCAGCAGAAGGATGCTATTCAGAAGAAGGGGAATGCGGCTGTTATCAAAGTGG
TGGAGAGTCAAATGGAACTCTATGAATTGGAACATCACAAGGAAGCAACGGTGGCAGACTTGCAAGCGGATGGCTATATT
ACTGAAAAACAAGCGGAGCAGTATGCTAAGGCGAAAAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus suis isolate S10	86.022	100	0.86
comGC/cglC	Streptococcus pneumoniae TIGR4	63.043	98.925	0.624
comGC/cglC	Streptococcus pneumoniae Rx1	63.043	98.925	0.624
comGC/cglC	Streptococcus pneumoniae D39	63.043	98.925	0.624
comGC/cglC	Streptococcus pneumoniae R6	63.043	98.925	0.624
comGC/cglC	Streptococcus mitis SK321	63.043	98.925	0.624
comGC/cglC	Streptococcus mitis NCTC 12261	63.043	98.925	0.624
comYC	Streptococcus gordonii str. Challis substr. CH1	62.921	95.699	0.602
comYC	Streptococcus mutans UA140	57.955	94.624	0.548
comYC	Streptococcus mutans UA159	57.955	94.624	0.548
comGC	Lactococcus lactis subsp. cremoris KW2	54.545	94.624	0.516
comGC	Staphylococcus aureus MW2	50.588	91.398	0.462
comGC	Staphylococcus aureus N315	50.588	91.398	0.462
comGC	Bacillus subtilis subsp. subtilis str. 168	48	80.645	0.387
comGC	Latilactobacillus sakei subsp. sakei 23K	42.5	86.022	0.366