Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | YHS_RS07820 | Genome accession | NZ_CP024176 |
| Coordinates | 1789999..1790454 (+) | Length | 151 a.a. |
| NCBI ID | WP_099834277.1 | Uniprot ID | - |
| Organism | Moraxella osloensis strain YHS | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1784999..1795454
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YHS_RS07805 (YHS_07815) | pseB | 1785470..1786468 (-) | 999 | WP_099834274.1 | UDP-N-acetylglucosamine 4,6-dehydratase (inverting) | - |
| YHS_RS07810 (YHS_07820) | - | 1786508..1787773 (-) | 1266 | WP_099834275.1 | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | - |
| YHS_RS07815 (YHS_07825) | - | 1787773..1789587 (-) | 1815 | WP_099834276.1 | PglL family O-oligosaccharyltransferase | - |
| YHS_RS07820 (YHS_07830) | pilA | 1789999..1790454 (+) | 456 | WP_099834277.1 | pilin | Machinery gene |
| YHS_RS07825 (YHS_07835) | - | 1790665..1791117 (-) | 453 | WP_198510413.1 | type IV pilin protein | - |
| YHS_RS07830 (YHS_07840) | - | 1791111..1791680 (-) | 570 | WP_320056666.1 | type IV pilin protein | - |
Sequence
Protein
Download Length: 151 a.a. Molecular weight: 15286.52 Da Isoelectric Point: 7.7719
>NTDB_id=252782 YHS_RS07820 WP_099834277.1 1789999..1790454(+) (pilA) [Moraxella osloensis strain YHS]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIARSQVSEAFAMTAAQKTAIAEYAQNNGAYPGASTKPTAASLAVAGT
YADAAVANGTGIITVTMKGAGDVNGRVAGKVITLTPPQDLTADSTSFNFACTSTGATGMAQKYLPKSCTGL
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIARSQVSEAFAMTAAQKTAIAEYAQNNGAYPGASTKPTAASLAVAGT
YADAAVANGTGIITVTMKGAGDVNGRVAGKVITLTPPQDLTADSTSFNFACTSTGATGMAQKYLPKSCTGL
Nucleotide
Download Length: 456 bp
>NTDB_id=252782 YHS_RS07820 WP_099834277.1 1789999..1790454(+) (pilA) [Moraxella osloensis strain YHS]
ATGAATGCTCAAAAAGGTTTTACCCTTATCGAATTGATGATCGTTGTCGCTATTATCGGTATTCTTGCAGCAATCGCAAT
TCCTGCTTATCAAGATTATATTGCTCGCTCACAAGTGTCTGAAGCATTTGCAATGACAGCTGCTCAAAAAACCGCAATTG
CTGAATATGCTCAAAATAATGGGGCTTATCCTGGAGCATCTACTAAGCCAACAGCGGCTAGCTTGGCAGTAGCAGGTACT
TATGCCGATGCTGCTGTAGCAAATGGTACTGGTATTATTACCGTTACTATGAAGGGTGCAGGCGATGTCAACGGTCGTGT
AGCAGGTAAAGTAATTACTTTAACGCCACCACAGGATCTGACTGCTGACAGTACATCTTTTAATTTCGCTTGTACTTCAA
CAGGTGCAACTGGTATGGCTCAAAAGTATTTGCCAAAATCTTGTACTGGTCTTTAA
ATGAATGCTCAAAAAGGTTTTACCCTTATCGAATTGATGATCGTTGTCGCTATTATCGGTATTCTTGCAGCAATCGCAAT
TCCTGCTTATCAAGATTATATTGCTCGCTCACAAGTGTCTGAAGCATTTGCAATGACAGCTGCTCAAAAAACCGCAATTG
CTGAATATGCTCAAAATAATGGGGCTTATCCTGGAGCATCTACTAAGCCAACAGCGGCTAGCTTGGCAGTAGCAGGTACT
TATGCCGATGCTGCTGTAGCAAATGGTACTGGTATTATTACCGTTACTATGAAGGGTGCAGGCGATGTCAACGGTCGTGT
AGCAGGTAAAGTAATTACTTTAACGCCACCACAGGATCTGACTGCTGACAGTACATCTTTTAATTTCGCTTGTACTTCAA
CAGGTGCAACTGGTATGGCTCAAAAGTATTTGCCAAAATCTTGTACTGGTCTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
47.712 |
100 |
0.483 |
| comP | Acinetobacter baylyi ADP1 |
44.72 |
100 |
0.477 |
| pilA | Pseudomonas aeruginosa PAK |
42.593 |
100 |
0.457 |
| pilA2 | Legionella pneumophila str. Paris |
45.89 |
96.689 |
0.444 |
| pilA/pilA1 | Eikenella corrodens VA1 |
42.038 |
100 |
0.437 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
45.205 |
96.689 |
0.437 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
40.252 |
100 |
0.424 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
43.243 |
98.013 |
0.424 |
| pilA | Acinetobacter nosocomialis M2 |
54.783 |
76.159 |
0.417 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
40.541 |
98.013 |
0.397 |
| pilA | Vibrio cholerae strain A1552 |
40.541 |
98.013 |
0.397 |
| pilA | Vibrio cholerae C6706 |
40.541 |
98.013 |
0.397 |
| pilE | Neisseria gonorrhoeae MS11 |
50.877 |
75.497 |
0.384 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
39.041 |
96.689 |
0.377 |