Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | CLI64_RS20915 | Genome accession | NZ_CP023278 |
| Coordinates | 5006099..5007223 (-) | Length | 374 a.a. |
| NCBI ID | WP_103139013.1 | Uniprot ID | A0A2I8AB85 |
| Organism | Nostoc sp. CENA543 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5001099..5012223
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLI64_RS20900 (CLI64_20760) | - | 5001389..5003248 (-) | 1860 | WP_103139010.1 | glycoside hydrolase family 2 protein | - |
| CLI64_RS20905 (CLI64_20765) | - | 5004153..5004710 (-) | 558 | WP_103139011.1 | hypothetical protein | - |
| CLI64_RS20910 (CLI64_20770) | - | 5004749..5005963 (-) | 1215 | WP_103139012.1 | type II secretion system F family protein | - |
| CLI64_RS20915 (CLI64_20775) | pilT | 5006099..5007223 (-) | 1125 | WP_103139013.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| CLI64_RS20920 (CLI64_20780) | pilB/pilB1 | 5007326..5009338 (-) | 2013 | WP_103139014.1 | GspE/PulE family protein | Machinery gene |
| CLI64_RS31665 | - | 5009598..5009756 (+) | 159 | WP_225977404.1 | hypothetical protein | - |
| CLI64_RS20925 (CLI64_20785) | grpE | 5009786..5010532 (+) | 747 | WP_103139015.1 | nucleotide exchange factor GrpE | - |
Sequence
Protein
Download Length: 374 a.a. Molecular weight: 40932.31 Da Isoelectric Point: 7.4405
>NTDB_id=245711 CLI64_RS20915 WP_103139013.1 5006099..5007223(-) (pilT) [Nostoc sp. CENA543]
MEMMIEDLMEQMIEMGGSDMHLSAGLPPYFRISGKLTPIGDNVLSAEQCQRLIFSMLNNTQRKTLEQTWELDCSYGVKGL
ARFRVNVYKERGAYAACLRALSSKIPNFEKLGLPDVVREMSDKPRGLILVTGPTGSGKTTTLAAMIDLINRTKAEHILTV
EDPIEFVYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVD
RIIDVFPHEKQTQVRVQLSNSLVAVFSQTLVPKKNPKPGEYGRVMAQEIMIVTPAISNLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADYYKAGTISFEAAMSKTSKPDEIQRLIGTAPPQAAAGAKPGAVKAH
MEMMIEDLMEQMIEMGGSDMHLSAGLPPYFRISGKLTPIGDNVLSAEQCQRLIFSMLNNTQRKTLEQTWELDCSYGVKGL
ARFRVNVYKERGAYAACLRALSSKIPNFEKLGLPDVVREMSDKPRGLILVTGPTGSGKTTTLAAMIDLINRTKAEHILTV
EDPIEFVYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVD
RIIDVFPHEKQTQVRVQLSNSLVAVFSQTLVPKKNPKPGEYGRVMAQEIMIVTPAISNLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADYYKAGTISFEAAMSKTSKPDEIQRLIGTAPPQAAAGAKPGAVKAH
Nucleotide
Download Length: 1125 bp
>NTDB_id=245711 CLI64_RS20915 WP_103139013.1 5006099..5007223(-) (pilT) [Nostoc sp. CENA543]
ATGGAAATGATGATTGAAGACTTGATGGAGCAAATGATTGAAATGGGTGGTTCGGATATGCACTTATCTGCCGGTTTACC
ACCCTATTTCCGGATCAGTGGTAAGCTCACACCCATTGGAGATAATGTCTTGAGCGCAGAGCAATGCCAAAGACTAATTT
TTAGTATGCTCAATAATACCCAGCGCAAAACCCTAGAACAAACCTGGGAATTGGACTGTTCCTATGGTGTCAAGGGTTTA
GCTCGTTTTCGGGTAAACGTTTATAAAGAGCGTGGTGCATATGCTGCTTGTTTGCGCGCTCTGAGTTCTAAAATCCCTAA
TTTTGAGAAATTAGGTTTACCAGATGTAGTCAGAGAAATGTCTGATAAACCCAGAGGGTTAATTTTGGTGACAGGCCCTA
CAGGTTCTGGTAAAACAACCACTCTAGCGGCAATGATTGATTTAATTAACCGCACTAAAGCCGAACATATCTTAACAGTA
GAAGACCCCATTGAATTTGTCTACGAACCAATTAAAAGTTTAGTCCACCAACGGCAATTGGGTGAAGATACTAAGAGTTT
TGCTAATGCCTTGAAAGCTGCCCTTCGGGAAGATCCAGATATCATTCTGGTGGGGGAAATGCGGGATTTAGAAACAATTT
CTTTGGCAATTTCTGCCGCAGAAACAGGACACTTAGTATTTGGTACATTACACACCAGTTCCGCCGCTCAAACTGTTGAC
CGGATTATTGACGTTTTTCCCCACGAAAAACAAACCCAAGTACGGGTGCAATTATCGAACTCTTTAGTAGCAGTATTTAG
TCAAACCTTAGTACCGAAGAAAAATCCTAAACCGGGTGAATATGGACGGGTAATGGCGCAGGAAATCATGATTGTTACTC
CCGCTATTTCTAACTTAATTCGTGAAGGGAAAACATCACAGATTTACTCTGCAATTCAAACAGGTGGTAAATTGGGAATG
CAAACTTTAGAAAAAGTTTTAGCAGATTACTACAAAGCAGGCACAATTTCTTTTGAAGCTGCAATGTCTAAAACTTCTAA
ACCAGATGAAATTCAACGCCTCATTGGTACTGCTCCCCCACAAGCCGCAGCAGGTGCAAAACCCGGTGCTGTCAAAGCAC
ATTAA
ATGGAAATGATGATTGAAGACTTGATGGAGCAAATGATTGAAATGGGTGGTTCGGATATGCACTTATCTGCCGGTTTACC
ACCCTATTTCCGGATCAGTGGTAAGCTCACACCCATTGGAGATAATGTCTTGAGCGCAGAGCAATGCCAAAGACTAATTT
TTAGTATGCTCAATAATACCCAGCGCAAAACCCTAGAACAAACCTGGGAATTGGACTGTTCCTATGGTGTCAAGGGTTTA
GCTCGTTTTCGGGTAAACGTTTATAAAGAGCGTGGTGCATATGCTGCTTGTTTGCGCGCTCTGAGTTCTAAAATCCCTAA
TTTTGAGAAATTAGGTTTACCAGATGTAGTCAGAGAAATGTCTGATAAACCCAGAGGGTTAATTTTGGTGACAGGCCCTA
CAGGTTCTGGTAAAACAACCACTCTAGCGGCAATGATTGATTTAATTAACCGCACTAAAGCCGAACATATCTTAACAGTA
GAAGACCCCATTGAATTTGTCTACGAACCAATTAAAAGTTTAGTCCACCAACGGCAATTGGGTGAAGATACTAAGAGTTT
TGCTAATGCCTTGAAAGCTGCCCTTCGGGAAGATCCAGATATCATTCTGGTGGGGGAAATGCGGGATTTAGAAACAATTT
CTTTGGCAATTTCTGCCGCAGAAACAGGACACTTAGTATTTGGTACATTACACACCAGTTCCGCCGCTCAAACTGTTGAC
CGGATTATTGACGTTTTTCCCCACGAAAAACAAACCCAAGTACGGGTGCAATTATCGAACTCTTTAGTAGCAGTATTTAG
TCAAACCTTAGTACCGAAGAAAAATCCTAAACCGGGTGAATATGGACGGGTAATGGCGCAGGAAATCATGATTGTTACTC
CCGCTATTTCTAACTTAATTCGTGAAGGGAAAACATCACAGATTTACTCTGCAATTCAAACAGGTGGTAAATTGGGAATG
CAAACTTTAGAAAAAGTTTTAGCAGATTACTACAAAGCAGGCACAATTTCTTTTGAAGCTGCAATGTCTAAAACTTCTAA
ACCAGATGAAATTCAACGCCTCATTGGTACTGCTCCCCCACAAGCCGCAGCAGGTGCAAAACCCGGTGCTGTCAAAGCAC
ATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
55.301 |
93.316 |
0.516 |
| pilT | Pseudomonas stutzeri DSM 10701 |
54.441 |
93.316 |
0.508 |
| pilT | Legionella pneumophila strain Lp02 |
53.026 |
92.781 |
0.492 |
| pilT | Acinetobacter baylyi ADP1 |
53.026 |
92.781 |
0.492 |
| pilT | Legionella pneumophila strain ERS1305867 |
53.026 |
92.781 |
0.492 |
| pilT | Acinetobacter baumannii strain A118 |
52.738 |
92.781 |
0.489 |
| pilT | Acinetobacter nosocomialis M2 |
52.738 |
92.781 |
0.489 |
| pilT | Acinetobacter baumannii D1279779 |
52.738 |
92.781 |
0.489 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.87 |
94.652 |
0.463 |
| pilT | Neisseria gonorrhoeae MS11 |
50.737 |
90.642 |
0.46 |
| pilT | Neisseria meningitidis 8013 |
48.997 |
93.316 |
0.457 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.415 |
91.444 |
0.452 |
| pilT | Vibrio cholerae strain A1552 |
49.415 |
91.444 |
0.452 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.527 |
94.385 |
0.364 |