Detailed information NTG0206878

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: BSR19_RS09730
• Genome accession: NZ_CP018187
• Coordinates: 2107506..2107832 (-)
• Length: 108 a.a.
• NCBI ID: WP_002885815.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ICDC2
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2102506..2112832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR19_RS09690 (BSR19_09820)	-	2102770..2103426 (-)	657	WP_037601483.1	CPBP family intramembrane glutamic endopeptidase	-
BSR19_RS09695 (BSR19_09825)	-	2103438..2103635 (-)	198	WP_002885716.1	helix-turn-helix transcriptional regulator	-
BSR19_RS09700 (BSR19_09830)	-	2103886..2105079 (-)	1194	WP_138261572.1	acetate kinase	-
BSR19_RS09705 (BSR19_09835)	comYH	2105136..2106092 (-)	957	WP_138261573.1	class I SAM-dependent methyltransferase	Machinery gene
BSR19_RS09710 (BSR19_09840)	comGG	2106137..2106454 (-)	318	WP_156247046.1	competence type IV pilus minor pilin ComGG	-
BSR19_RS09715 (BSR19_09845)	comYF	2106432..2106869 (-)	438	WP_045769383.1	competence type IV pilus minor pilin ComGF	Machinery gene
BSR19_RS09720 (BSR19_09850)	comGE	2106856..2107086 (-)	231	WP_002887015.1	competence type IV pilus minor pilin ComGE	-
BSR19_RS09725 (BSR19_09855)	comYD	2107118..2107546 (-)	429	WP_014632541.1	competence type IV pilus minor pilin ComGD	Machinery gene
BSR19_RS09730 (BSR19_09860)	comYC	2107506..2107832 (-)	327	WP_002885815.1	competence type IV pilus major pilin ComGC	Machinery gene
BSR19_RS09735 (BSR19_09865)	comYB	2107829..2108929 (-)	1101	WP_156247047.1	competence type IV pilus assembly protein ComGB	Machinery gene
BSR19_RS09740 (BSR19_09870)	comYA	2108811..2109752 (-)	942	WP_002885658.1	competence type IV pilus ATPase ComGA	Machinery gene
BSR19_RS09745 (BSR19_09875)	-	2109834..2110196 (-)	363	WP_002887019.1	DUF1033 family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 11932.03 Da
• Isoelectric Point: 9.9219

>NTDB_id=206878 BSR19_RS09730 WP_002885815.1 2107506..2107832(-) (comYC) [Streptococcus salivarius strain ICDC2]
MKMMLKKLNAVKLRAFTLIEMLVVLLIISILLLLFVPNLSKQKDSVKETGNAAVVKVVDSQAELYEMKNNKTASLAALVS
EGQITQKQADSYNDYYAKHGGESRSVAN

Nucleotide

• Length: 327 bp

>NTDB_id=206878 BSR19_RS09730 WP_002885815.1 2107506..2107832(-) (comYC) [Streptococcus salivarius strain ICDC2]
ATGAAAATGATGTTAAAAAAATTGAATGCCGTTAAACTACGAGCTTTTACGCTAATTGAAATGCTAGTCGTGCTTCTCAT
TATCAGTATTCTCCTCTTGCTTTTTGTTCCTAACTTGAGTAAGCAGAAGGATTCTGTTAAAGAGACTGGAAATGCGGCTG
TGGTCAAGGTCGTGGATTCTCAAGCAGAACTTTATGAAATGAAGAATAACAAGACAGCTAGCTTAGCAGCTCTTGTTTCA
GAAGGTCAAATCACGCAAAAACAGGCAGATTCATACAATGATTACTATGCGAAACATGGTGGCGAAAGCCGCTCAGTGGC
CAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (14-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus mutans UA140	69.231	96.296	0.667
comYC	Streptococcus mutans UA159	69.231	96.296	0.667
comYC	Streptococcus gordonii str. Challis substr. CH1	63.81	97.222	0.62
comGC/cglC	Streptococcus mitis SK321	62.264	98.148	0.611
comGC/cglC	Streptococcus mitis NCTC 12261	58.333	100	0.583
comGC/cglC	Streptococcus pneumoniae D39	58.491	98.148	0.574
comGC/cglC	Streptococcus pneumoniae R6	58.491	98.148	0.574
comGC/cglC	Streptococcus pneumoniae Rx1	58.491	98.148	0.574
comGC/cglC	Streptococcus pneumoniae TIGR4	58.491	98.148	0.574
comGC	Lactococcus lactis subsp. cremoris KW2	56.604	98.148	0.556
comYC	Streptococcus suis isolate S10	60.227	81.481	0.491
comGC	Staphylococcus aureus MW2	50	72.222	0.361
comGC	Staphylococcus aureus N315	50	72.222	0.361