Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | PMA3_RS03415 | Genome accession | NZ_CP014870 |
| Coordinates | 771878..772291 (+) | Length | 137 a.a. |
| NCBI ID | WP_064675855.1 | Uniprot ID | A0A191YN04 |
| Organism | Pseudomonas silesiensis strain A3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 766878..777291
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PMA3_RS03390 (PMA3_03385) | yacG | 767040..767240 (-) | 201 | WP_064675850.1 | DNA gyrase inhibitor YacG | - |
| PMA3_RS03395 (PMA3_03390) | coaE | 767237..767860 (-) | 624 | WP_064675851.1 | dephospho-CoA kinase | - |
| PMA3_RS03400 (PMA3_03395) | pilD | 767857..768729 (-) | 873 | WP_064675852.1 | prepilin peptidase | Machinery gene |
| PMA3_RS03405 (PMA3_03400) | pilC | 768731..769948 (-) | 1218 | WP_064675853.1 | type II secretion system F family protein | Machinery gene |
| PMA3_RS03410 (PMA3_03405) | pilB | 769951..771651 (-) | 1701 | WP_064675854.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| PMA3_RS03415 (PMA3_03410) | pilA | 771878..772291 (+) | 414 | WP_064675855.1 | pilin | Machinery gene |
| PMA3_RS03420 (PMA3_03415) | - | 772606..772959 (+) | 354 | WP_064675856.1 | BON domain-containing protein | - |
| PMA3_RS03425 (PMA3_03420) | - | 773245..773544 (-) | 300 | WP_420848612.1 | DUF2845 domain-containing protein | - |
| PMA3_RS03430 (PMA3_03425) | - | 773541..776492 (-) | 2952 | WP_064675858.1 | DUF748 domain-containing protein | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 13875.10 Da Isoelectric Point: 7.5910
>NTDB_id=174910 PMA3_RS03415 WP_064675855.1 771878..772291(+) (pilA) [Pseudomonas silesiensis strain A3]
MNTQKGFTLIELLIVVAIIGILATFALPAYSKYQAKAKVTAGLAEISALKIPFEDLMNNGNSPANVAAIGGVSPTPNCTL
TASGTATDGTGTIVCTIVNAPAPVLGKTITLTRSTTGWVCTSTAGEDFLPKGCTTGV
MNTQKGFTLIELLIVVAIIGILATFALPAYSKYQAKAKVTAGLAEISALKIPFEDLMNNGNSPANVAAIGGVSPTPNCTL
TASGTATDGTGTIVCTIVNAPAPVLGKTITLTRSTTGWVCTSTAGEDFLPKGCTTGV
Nucleotide
Download Length: 414 bp
>NTDB_id=174910 PMA3_RS03415 WP_064675855.1 771878..772291(+) (pilA) [Pseudomonas silesiensis strain A3]
ATGAATACTCAGAAAGGTTTTACGCTGATTGAGCTGTTGATCGTTGTGGCGATCATCGGGATTCTTGCGACGTTTGCGTT
GCCGGCTTACTCCAAATATCAGGCGAAGGCCAAGGTCACCGCTGGCCTGGCGGAGATTTCGGCGCTGAAAATACCATTTG
AAGACCTTATGAATAACGGGAACAGCCCGGCGAATGTGGCGGCAATTGGGGGGGTTAGCCCAACTCCAAACTGCACGCTG
ACAGCGTCTGGTACAGCCACTGATGGTACCGGGACTATTGTTTGTACGATCGTTAACGCGCCTGCACCGGTTTTAGGCAA
GACGATCACGCTGACGCGCTCGACGACTGGCTGGGTTTGCACCAGCACCGCGGGCGAGGACTTCTTGCCTAAAGGTTGCA
CCACTGGCGTTTAA
ATGAATACTCAGAAAGGTTTTACGCTGATTGAGCTGTTGATCGTTGTGGCGATCATCGGGATTCTTGCGACGTTTGCGTT
GCCGGCTTACTCCAAATATCAGGCGAAGGCCAAGGTCACCGCTGGCCTGGCGGAGATTTCGGCGCTGAAAATACCATTTG
AAGACCTTATGAATAACGGGAACAGCCCGGCGAATGTGGCGGCAATTGGGGGGGTTAGCCCAACTCCAAACTGCACGCTG
ACAGCGTCTGGTACAGCCACTGATGGTACCGGGACTATTGTTTGTACGATCGTTAACGCGCCTGCACCGGTTTTAGGCAA
GACGATCACGCTGACGCGCTCGACGACTGGCTGGGTTTGCACCAGCACCGCGGGCGAGGACTTCTTGCCTAAAGGTTGCA
CCACTGGCGTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
48.571 |
100 |
0.496 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
45.985 |
100 |
0.46 |
| pilA2 | Legionella pneumophila str. Paris |
43.357 |
100 |
0.453 |
| pilA | Pseudomonas aeruginosa PAK |
40 |
100 |
0.453 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
42.657 |
100 |
0.445 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
44.444 |
98.54 |
0.438 |
| comP | Acinetobacter baylyi ADP1 |
37.415 |
100 |
0.401 |
| pilA | Vibrio cholerae strain A1552 |
38.732 |
100 |
0.401 |
| pilA | Vibrio cholerae C6706 |
38.732 |
100 |
0.401 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
38.732 |
100 |
0.401 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
43.089 |
89.781 |
0.387 |