Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | A3224_RS05305 | Genome accession | NZ_CP014864 |
| Coordinates | 1265146..1265574 (+) | Length | 142 a.a. |
| NCBI ID | WP_067157510.1 | Uniprot ID | A0A143HS25 |
| Organism | Microbulbifer thermotolerans strain DAU221 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1260146..1270574
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A3224_RS05290 (A3224_05290) | pilD | 1260805..1261689 (-) | 885 | WP_067152289.1 | A24 family peptidase | Machinery gene |
| A3224_RS05295 (A3224_05295) | pilC | 1261695..1262906 (-) | 1212 | WP_067152291.1 | type II secretion system F family protein | Machinery gene |
| A3224_RS05300 (A3224_05300) | pilB | 1262976..1264688 (-) | 1713 | WP_067152294.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| A3224_RS05305 (A3224_05305) | pilA | 1265146..1265574 (+) | 429 | WP_067157510.1 | pilin | Machinery gene |
| A3224_RS05310 (A3224_05310) | - | 1265685..1267562 (+) | 1878 | WP_067152297.1 | hypothetical protein | - |
| A3224_RS05315 (A3224_05315) | - | 1267691..1268632 (+) | 942 | WP_197463058.1 | decaprenyl-phosphate phosphoribosyltransferase | - |
| A3224_RS05320 (A3224_05320) | - | 1268632..1269588 (+) | 957 | WP_067152299.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 14256.24 Da Isoelectric Point: 6.1916
>NTDB_id=174817 A3224_RS05305 WP_067157510.1 1265146..1265574(+) (pilA) [Microbulbifer thermotolerans strain DAU221]
MKKQQGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKVTEGLALASAAKATVAENAVSGTSPLNLGWTPPGSTDAVNAV
AVDGSTGVITITYSNSAGNGTITLSPAAGGSALSAGTVPTTSLVWDCKGGSLDDKFRPSNCR
MKKQQGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKVTEGLALASAAKATVAENAVSGTSPLNLGWTPPGSTDAVNAV
AVDGSTGVITITYSNSAGNGTITLSPAAGGSALSAGTVPTTSLVWDCKGGSLDDKFRPSNCR
Nucleotide
Download Length: 429 bp
>NTDB_id=174817 A3224_RS05305 WP_067157510.1 1265146..1265574(+) (pilA) [Microbulbifer thermotolerans strain DAU221]
ATGAAAAAGCAACAGGGTTTTACTCTTATTGAATTGATGATCGTGGTTGCGATTATCGGCATTCTGGCTGCGGTGGCGCT
GCCGGCTTATCAGGATTACACGGTTCGCGCGAAAGTAACAGAAGGTTTAGCGCTGGCTTCTGCAGCTAAAGCCACAGTGG
CTGAGAACGCGGTCAGCGGTACTTCCCCGCTGAACTTGGGCTGGACTCCACCGGGTTCTACTGATGCTGTTAATGCAGTT
GCTGTTGACGGCTCTACCGGCGTGATTACTATTACCTACAGCAATAGTGCAGGTAATGGCACTATTACGTTGAGTCCGGC
TGCTGGTGGTAGTGCACTGAGTGCTGGTACAGTCCCGACTACCAGTCTTGTTTGGGACTGCAAAGGCGGCTCCCTGGATG
ACAAATTTCGCCCGAGCAACTGCCGCTGA
ATGAAAAAGCAACAGGGTTTTACTCTTATTGAATTGATGATCGTGGTTGCGATTATCGGCATTCTGGCTGCGGTGGCGCT
GCCGGCTTATCAGGATTACACGGTTCGCGCGAAAGTAACAGAAGGTTTAGCGCTGGCTTCTGCAGCTAAAGCCACAGTGG
CTGAGAACGCGGTCAGCGGTACTTCCCCGCTGAACTTGGGCTGGACTCCACCGGGTTCTACTGATGCTGTTAATGCAGTT
GCTGTTGACGGCTCTACCGGCGTGATTACTATTACCTACAGCAATAGTGCAGGTAATGGCACTATTACGTTGAGTCCGGC
TGCTGGTGGTAGTGCACTGAGTGCTGGTACAGTCCCGACTACCAGTCTTGTTTGGGACTGCAAAGGCGGCTCCCTGGATG
ACAAATTTCGCCCGAGCAACTGCCGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
45.912 |
100 |
0.514 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
49.306 |
100 |
0.5 |
| pilA2 | Legionella pneumophila str. Paris |
49.306 |
100 |
0.5 |
| comP | Acinetobacter baylyi ADP1 |
43.038 |
100 |
0.479 |
| pilE | Neisseria gonorrhoeae MS11 |
39.752 |
100 |
0.451 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
38.182 |
100 |
0.444 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.81 |
100 |
0.423 |
| pilA | Pseudomonas aeruginosa PAK |
37.821 |
100 |
0.415 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
40.136 |
100 |
0.415 |
| pilA | Acinetobacter baumannii strain A118 |
39.716 |
99.296 |
0.394 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38.028 |
100 |
0.38 |