Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | amyaer_RS06300 | Genome accession | NZ_CP012375 |
| Coordinates | 1316257..1317363 (-) | Length | 368 a.a. |
| NCBI ID | WP_046661441.1 | Uniprot ID | A0A0F6U2N0 |
| Organism | Microcystis aeruginosa NIES-2481 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1311257..1322363
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| amyaer_RS06290 (amyaer_1295) | - | 1312216..1314786 (+) | 2571 | WP_046661439.1 | TIGR03960 family B12-binding radical SAM protein | - |
| amyaer_RS06295 (amyaer_1296) | - | 1314922..1316136 (-) | 1215 | WP_046661440.1 | type II secretion system F family protein | - |
| amyaer_RS06300 (amyaer_1297) | pilT | 1316257..1317363 (-) | 1107 | WP_046661441.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| amyaer_RS06305 (amyaer_1298) | pilB/pilB1 | 1317485..1319497 (-) | 2013 | WP_066029671.1 | GspE/PulE family protein | Machinery gene |
| amyaer_RS06310 (amyaer_1299) | grpE | 1319738..1320460 (+) | 723 | WP_046661443.1 | nucleotide exchange factor GrpE | - |
| amyaer_RS06315 (amyaer_1300) | - | 1320640..1321299 (-) | 660 | WP_046661444.1 | HAD-IA family hydrolase | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 40577.75 Da Isoelectric Point: 6.6523
>NTDB_id=153937 amyaer_RS06300 WP_046661441.1 1316257..1317363(-) (pilT) [Microcystis aeruginosa NIES-2481]
MDLMIEDLMEQLVEMGGSDMHIQSRAPVYFRISGKLTPINEESLTPQDCQKLIFSMLNNSQIKELEQNWELDCSYGVKGL
ARFRINVYKERGAYAACLRALSSNIPNFEQLNLPEVVRELSERPRGLILVTGPTGSGKTTTLASILDLINRTRSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALKAALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTSSAAGTVD
RIIDVFPPNQQSQIRSMLSNSLLAVFSQTLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGM
QTMEQGLANLVFSGVISFEEAISKSGKPDELQRLVAGASANAKTKARI
MDLMIEDLMEQLVEMGGSDMHIQSRAPVYFRISGKLTPINEESLTPQDCQKLIFSMLNNSQIKELEQNWELDCSYGVKGL
ARFRINVYKERGAYAACLRALSSNIPNFEQLNLPEVVRELSERPRGLILVTGPTGSGKTTTLASILDLINRTRSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALKAALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTSSAAGTVD
RIIDVFPPNQQSQIRSMLSNSLLAVFSQTLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGM
QTMEQGLANLVFSGVISFEEAISKSGKPDELQRLVAGASANAKTKARI
Nucleotide
Download Length: 1107 bp
>NTDB_id=153937 amyaer_RS06300 WP_046661441.1 1316257..1317363(-) (pilT) [Microcystis aeruginosa NIES-2481]
ATGGACTTAATGATCGAAGATTTAATGGAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCCAGGGCGCC
GGTCTATTTCCGCATTAGTGGCAAACTCACCCCGATTAATGAAGAATCTTTAACCCCGCAAGATTGTCAGAAATTGATTT
TTAGTATGCTCAATAATAGTCAAATAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCCTACGGGGTGAAAGGATTA
GCAAGATTTAGGATCAATGTTTATAAAGAAAGGGGAGCCTATGCAGCTTGTTTACGCGCTTTGTCCTCCAACATTCCTAA
CTTTGAACAATTAAATTTACCAGAAGTAGTCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACCGGACCAA
CAGGGTCAGGTAAAACTACCACTTTAGCATCAATTTTGGACTTAATTAATCGGACTAGGTCTGAACACATTTTAACTGTA
GAAGACCCAATTGAATATGTTTTTCCTAATATAAAAAGCCTGTTTCACCAACGACAAAAAGGAGAAGATACCAAGAGTTT
TGCTAACGCATTAAAAGCAGCTTTACGCGAAGATCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTA
GTTTGGCAATTACGGCGGCGGAAACCGGTCACTTAGTCTTCGGAACTCTGCACACTAGCTCGGCAGCGGGAACAGTCGAT
CGGATCATTGACGTTTTCCCCCCTAACCAACAGTCACAAATTCGCTCCATGTTATCCAATTCTTTACTAGCAGTTTTTAG
TCAAACCCTAGTCAAGAAAAAAAATCCTAAACCAGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTC
CAGCGATCGCTAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTCTACTCAGCAATTCAAACGGGAATGAAGCTAGGAATG
CAAACTATGGAACAGGGATTAGCTAATTTAGTTTTTAGCGGTGTTATATCCTTTGAAGAGGCAATTTCTAAAAGTGGTAA
ACCCGATGAATTACAACGTCTTGTCGCTGGGGCCAGTGCTAACGCCAAAACTAAAGCCCGGATTTAA
ATGGACTTAATGATCGAAGATTTAATGGAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCCAGGGCGCC
GGTCTATTTCCGCATTAGTGGCAAACTCACCCCGATTAATGAAGAATCTTTAACCCCGCAAGATTGTCAGAAATTGATTT
TTAGTATGCTCAATAATAGTCAAATAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCCTACGGGGTGAAAGGATTA
GCAAGATTTAGGATCAATGTTTATAAAGAAAGGGGAGCCTATGCAGCTTGTTTACGCGCTTTGTCCTCCAACATTCCTAA
CTTTGAACAATTAAATTTACCAGAAGTAGTCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACCGGACCAA
CAGGGTCAGGTAAAACTACCACTTTAGCATCAATTTTGGACTTAATTAATCGGACTAGGTCTGAACACATTTTAACTGTA
GAAGACCCAATTGAATATGTTTTTCCTAATATAAAAAGCCTGTTTCACCAACGACAAAAAGGAGAAGATACCAAGAGTTT
TGCTAACGCATTAAAAGCAGCTTTACGCGAAGATCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTA
GTTTGGCAATTACGGCGGCGGAAACCGGTCACTTAGTCTTCGGAACTCTGCACACTAGCTCGGCAGCGGGAACAGTCGAT
CGGATCATTGACGTTTTCCCCCCTAACCAACAGTCACAAATTCGCTCCATGTTATCCAATTCTTTACTAGCAGTTTTTAG
TCAAACCCTAGTCAAGAAAAAAAATCCTAAACCAGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTC
CAGCGATCGCTAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTCTACTCAGCAATTCAAACGGGAATGAAGCTAGGAATG
CAAACTATGGAACAGGGATTAGCTAATTTAGTTTTTAGCGGTGTTATATCCTTTGAAGAGGCAATTTCTAAAAGTGGTAA
ACCCGATGAATTACAACGTCTTGTCGCTGGGGCCAGTGCTAACGCCAAAACTAAAGCCCGGATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
51.884 |
93.75 |
0.486 |
| pilT | Legionella pneumophila strain Lp02 |
51.884 |
93.75 |
0.486 |
| pilT | Pseudomonas aeruginosa PAK |
50.72 |
94.293 |
0.478 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.432 |
94.293 |
0.476 |
| pilT | Acinetobacter baylyi ADP1 |
49.568 |
94.293 |
0.467 |
| pilT | Acinetobacter baumannii D1279779 |
49.568 |
94.293 |
0.467 |
| pilT | Acinetobacter baumannii strain A118 |
49.568 |
94.293 |
0.467 |
| pilT | Acinetobacter nosocomialis M2 |
49.568 |
94.293 |
0.467 |
| pilT | Vibrio cholerae strain A1552 |
50 |
92.391 |
0.462 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50 |
92.391 |
0.462 |
| pilT | Neisseria gonorrhoeae MS11 |
48.378 |
92.12 |
0.446 |
| pilT | Neisseria meningitidis 8013 |
48.378 |
92.12 |
0.446 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.938 |
97.011 |
0.446 |