Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | SU48_RS00010 | Genome accession | NZ_CP011387 |
| Coordinates | 2101..3372 (+) | Length | 423 a.a. |
| NCBI ID | WP_064013451.1 | Uniprot ID | A0A172T631 |
| Organism | Deinococcus puniceus strain DY1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1..8372
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SU48_RS00010 (SU48_00010) | pilT | 2101..3372 (+) | 1272 | WP_064013451.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| SU48_RS00015 | - | 3622..4245 (+) | 624 | WP_064013452.1 | ATP-binding cassette domain-containing protein | - |
| SU48_RS00020 (SU48_00020) | - | 4242..5531 (+) | 1290 | WP_064013453.1 | hypothetical protein | - |
| SU48_RS00025 (SU48_00025) | - | 5540..5755 (-) | 216 | WP_064013454.1 | hypothetical protein | - |
| SU48_RS00030 (SU48_00030) | lon | 5881..8313 (-) | 2433 | WP_064013455.1 | endopeptidase La | - |
Sequence
Protein
Download Length: 423 a.a. Molecular weight: 45723.09 Da Isoelectric Point: 7.5620
>NTDB_id=145352 SU48_RS00010 WP_064013451.1 2101..3372(+) (pilT) [Deinococcus puniceus strain DY1]
MTQAPVDITDILRLATEKGASDVILTVGLPPQLKMHGVYDGHGMPELAPTDTRKLMYSMMNERQQRTFEERRELDFSFAL
GEKARFRVNAFMQRGNVGGVLRLIPTQIKSAQEMGLPQNIVDIATAPRGLVLITGPTGSGKSTTLAAMIDYINTTRRLHI
VTIEDPIEFMHTHKQSIINQREVGSDTMSFNDALRAALRQAPDVILVGEMRDYETIKAAVTAAETGHLVMGTLHTNSAPE
SIDRIVDVFPEEQQAQIRVQLANNLVAVMTQQLLPRADGAGRVLAYELLLANPAVRSLIREGKTFQIVSTMQTGAREGMV
TMDAYLANLYRRRIISYDIGLERSIDPKEFARLANDTTTSLGAAANLGPPASSGAGAAGGYKPAGGAAQGGYGAGREEAG
RGTDTRTTSTTLPNTGRTPFGRG
MTQAPVDITDILRLATEKGASDVILTVGLPPQLKMHGVYDGHGMPELAPTDTRKLMYSMMNERQQRTFEERRELDFSFAL
GEKARFRVNAFMQRGNVGGVLRLIPTQIKSAQEMGLPQNIVDIATAPRGLVLITGPTGSGKSTTLAAMIDYINTTRRLHI
VTIEDPIEFMHTHKQSIINQREVGSDTMSFNDALRAALRQAPDVILVGEMRDYETIKAAVTAAETGHLVMGTLHTNSAPE
SIDRIVDVFPEEQQAQIRVQLANNLVAVMTQQLLPRADGAGRVLAYELLLANPAVRSLIREGKTFQIVSTMQTGAREGMV
TMDAYLANLYRRRIISYDIGLERSIDPKEFARLANDTTTSLGAAANLGPPASSGAGAAGGYKPAGGAAQGGYGAGREEAG
RGTDTRTTSTTLPNTGRTPFGRG
Nucleotide
Download Length: 1272 bp
>NTDB_id=145352 SU48_RS00010 WP_064013451.1 2101..3372(+) (pilT) [Deinococcus puniceus strain DY1]
ATGACTCAGGCTCCTGTAGACATTACCGATATTCTCCGCCTCGCCACCGAAAAGGGCGCGTCCGACGTGATTCTGACGGT
GGGTTTGCCGCCGCAACTGAAGATGCACGGCGTCTACGACGGTCACGGCATGCCGGAACTGGCCCCCACCGATACCCGCA
AACTGATGTATTCCATGATGAATGAGCGCCAGCAGCGCACCTTCGAAGAACGGCGCGAACTGGATTTCAGCTTTGCGCTG
GGCGAAAAAGCCCGGTTTCGCGTGAACGCCTTTATGCAGCGCGGCAACGTGGGCGGCGTACTGCGGCTGATTCCGACTCA
GATCAAGAGCGCTCAGGAAATGGGCCTGCCCCAGAACATCGTGGACATCGCCACTGCGCCGCGCGGCCTGGTGCTGATTA
CCGGGCCAACTGGATCGGGCAAAAGCACCACGCTGGCCGCCATGATCGACTACATCAACACGACGCGCAGGCTGCATATC
GTCACCATCGAAGACCCCATCGAGTTCATGCACACGCACAAGCAGAGCATCATCAACCAGCGCGAAGTCGGCTCGGACAC
CATGAGCTTCAACGACGCCCTCCGCGCCGCCCTGCGCCAAGCCCCCGACGTGATTCTGGTGGGCGAAATGCGCGACTACG
AAACCATCAAGGCCGCTGTGACCGCCGCCGAAACCGGACACTTAGTGATGGGCACGCTACACACCAACTCCGCCCCGGAA
TCTATTGACCGAATCGTGGACGTGTTTCCCGAAGAGCAGCAGGCGCAGATTCGGGTGCAGCTCGCCAACAACCTCGTGGC
CGTGATGACCCAGCAACTCTTGCCGCGTGCCGACGGTGCGGGCCGCGTGCTGGCCTACGAACTGCTGCTGGCCAACCCCG
CCGTGCGCTCGCTGATCCGCGAGGGCAAAACCTTCCAGATCGTGTCTACGATGCAGACCGGGGCGCGGGAAGGCATGGTC
ACAATGGACGCCTACCTCGCCAACCTGTACCGCCGCCGGATCATCTCCTACGACATCGGCTTGGAGCGGTCTATCGATCC
CAAGGAGTTTGCGCGCCTCGCCAACGACACCACCACCAGTCTGGGGGCGGCAGCCAACCTCGGCCCCCCGGCCAGCAGCG
GTGCGGGCGCAGCGGGCGGCTACAAACCCGCGGGCGGCGCGGCGCAGGGCGGCTACGGCGCGGGCCGGGAAGAGGCCGGG
CGCGGTACCGACACCCGCACGACCAGCACGACGTTGCCGAATACCGGGCGCACGCCGTTTGGCCGGGGCTGA
ATGACTCAGGCTCCTGTAGACATTACCGATATTCTCCGCCTCGCCACCGAAAAGGGCGCGTCCGACGTGATTCTGACGGT
GGGTTTGCCGCCGCAACTGAAGATGCACGGCGTCTACGACGGTCACGGCATGCCGGAACTGGCCCCCACCGATACCCGCA
AACTGATGTATTCCATGATGAATGAGCGCCAGCAGCGCACCTTCGAAGAACGGCGCGAACTGGATTTCAGCTTTGCGCTG
GGCGAAAAAGCCCGGTTTCGCGTGAACGCCTTTATGCAGCGCGGCAACGTGGGCGGCGTACTGCGGCTGATTCCGACTCA
GATCAAGAGCGCTCAGGAAATGGGCCTGCCCCAGAACATCGTGGACATCGCCACTGCGCCGCGCGGCCTGGTGCTGATTA
CCGGGCCAACTGGATCGGGCAAAAGCACCACGCTGGCCGCCATGATCGACTACATCAACACGACGCGCAGGCTGCATATC
GTCACCATCGAAGACCCCATCGAGTTCATGCACACGCACAAGCAGAGCATCATCAACCAGCGCGAAGTCGGCTCGGACAC
CATGAGCTTCAACGACGCCCTCCGCGCCGCCCTGCGCCAAGCCCCCGACGTGATTCTGGTGGGCGAAATGCGCGACTACG
AAACCATCAAGGCCGCTGTGACCGCCGCCGAAACCGGACACTTAGTGATGGGCACGCTACACACCAACTCCGCCCCGGAA
TCTATTGACCGAATCGTGGACGTGTTTCCCGAAGAGCAGCAGGCGCAGATTCGGGTGCAGCTCGCCAACAACCTCGTGGC
CGTGATGACCCAGCAACTCTTGCCGCGTGCCGACGGTGCGGGCCGCGTGCTGGCCTACGAACTGCTGCTGGCCAACCCCG
CCGTGCGCTCGCTGATCCGCGAGGGCAAAACCTTCCAGATCGTGTCTACGATGCAGACCGGGGCGCGGGAAGGCATGGTC
ACAATGGACGCCTACCTCGCCAACCTGTACCGCCGCCGGATCATCTCCTACGACATCGGCTTGGAGCGGTCTATCGATCC
CAAGGAGTTTGCGCGCCTCGCCAACGACACCACCACCAGTCTGGGGGCGGCAGCCAACCTCGGCCCCCCGGCCAGCAGCG
GTGCGGGCGCAGCGGGCGGCTACAAACCCGCGGGCGGCGCGGCGCAGGGCGGCTACGGCGCGGGCCGGGAAGAGGCCGGG
CGCGGTACCGACACCCGCACGACCAGCACGACGTTGCCGAATACCGGGCGCACGCCGTTTGGCCGGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
76.413 |
96.217 |
0.735 |
| pilT | Acinetobacter nosocomialis M2 |
51.304 |
81.56 |
0.418 |
| pilT | Acinetobacter baumannii D1279779 |
51.304 |
81.56 |
0.418 |
| pilT | Acinetobacter baumannii strain A118 |
51.304 |
81.56 |
0.418 |
| pilT | Acinetobacter baylyi ADP1 |
51.014 |
81.56 |
0.416 |
| pilT | Neisseria meningitidis 8013 |
51.02 |
81.087 |
0.414 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.145 |
81.56 |
0.409 |
| pilT | Pseudomonas aeruginosa PAK |
49.855 |
81.56 |
0.407 |
| pilT | Neisseria gonorrhoeae MS11 |
51.662 |
78.251 |
0.404 |
| pilT | Legionella pneumophila strain ERS1305867 |
49.565 |
81.56 |
0.404 |
| pilT | Legionella pneumophila strain Lp02 |
49.565 |
81.56 |
0.404 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
48.555 |
81.797 |
0.397 |
| pilT | Vibrio cholerae strain A1552 |
48.555 |
81.797 |
0.397 |
| pilU | Pseudomonas stutzeri DSM 10701 |
43.662 |
83.924 |
0.366 |