Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | D082_RS13615 | Genome accession | NZ_CP007542 |
| Coordinates | 2985214..2986311 (+) | Length | 365 a.a. |
| NCBI ID | WP_038530986.1 | Uniprot ID | A0A068N075 |
| Organism | Synechocystis sp. PCC 6714 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2980214..2991311
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D082_RS13610 (D082_30000) | - | 2983419..2984822 (-) | 1404 | WP_028947122.1 | efflux RND transporter periplasmic adaptor subunit | - |
| D082_RS13615 (D082_30020) | pilT | 2985214..2986311 (+) | 1098 | WP_038530986.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| D082_RS13620 (D082_30030) | - | 2986457..2987671 (+) | 1215 | WP_028947120.1 | type II secretion system F family protein | - |
| D082_RS13625 (D082_30060) | gap | 2988081..2989100 (-) | 1020 | WP_028947119.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| D082_RS13630 (D082_30070) | - | 2989459..2989887 (+) | 429 | WP_028947118.1 | Npun_F0494 family protein | - |
| D082_RS13635 (D082_30080) | pdxH | 2989899..2990543 (-) | 645 | WP_028947117.1 | pyridoxamine 5'-phosphate oxidase | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 40144.38 Da Isoelectric Point: 6.6528
>NTDB_id=120744 D082_RS13615 WP_038530986.1 2985214..2986311(+) (pilT) [Synechocystis sp. PCC 6714]
MALEYMIEDLMEQLVEMGGSDMHIQAGAPVYFRVSGKLEPINEEVLTPQESQKLIFSMLNNSQRKELEQNWELDCSYGVK
GLARFRINVYKERGCYAACLRALSSKIPNFEQLGLPNIVREMAERPRGLILVTGQTGSGKTTTLAAILDLINRTRAEHIL
TIEDPIEYVFPNVRSLFHQRQRGEDTKSFANALREDPDIVLVGELRDLETIALAITAAETGHLVFGTLHTNSAASTIDRM
LDVFPANQQAQIRAMLSNSLLAVFAQNLVKKKAPKPGEFGRALVQEIMVITPAIANLIREGKAAQIYSAIQTGAKLGMQT
MEQGLATLVVSGVISLEEGLAKSGKPDELQRLIGGMAPQAAAKRR
MALEYMIEDLMEQLVEMGGSDMHIQAGAPVYFRVSGKLEPINEEVLTPQESQKLIFSMLNNSQRKELEQNWELDCSYGVK
GLARFRINVYKERGCYAACLRALSSKIPNFEQLGLPNIVREMAERPRGLILVTGQTGSGKTTTLAAILDLINRTRAEHIL
TIEDPIEYVFPNVRSLFHQRQRGEDTKSFANALREDPDIVLVGELRDLETIALAITAAETGHLVFGTLHTNSAASTIDRM
LDVFPANQQAQIRAMLSNSLLAVFAQNLVKKKAPKPGEFGRALVQEIMVITPAIANLIREGKAAQIYSAIQTGAKLGMQT
MEQGLATLVVSGVISLEEGLAKSGKPDELQRLIGGMAPQAAAKRR
Nucleotide
Download Length: 1098 bp
>NTDB_id=120744 D082_RS13615 WP_038530986.1 2985214..2986311(+) (pilT) [Synechocystis sp. PCC 6714]
ATGGCTTTGGAATACATGATCGAAGACCTCATGGAGCAGTTGGTGGAAATGGGTGGCTCCGATATGCATATCCAGGCGGG
GGCGCCGGTCTATTTCCGGGTGAGTGGTAAATTAGAACCCATCAATGAAGAAGTCTTAACTCCCCAGGAAAGCCAAAAGT
TAATCTTTAGCATGCTCAACAATTCCCAGCGGAAAGAACTGGAACAAAATTGGGAGTTAGACTGTTCCTATGGCGTTAAG
GGGTTGGCTCGCTTTCGGATCAATGTGTACAAAGAACGGGGGTGCTACGCCGCCTGCCTACGGGCCCTTTCCTCCAAAAT
TCCTAACTTTGAGCAACTGGGACTGCCCAACATTGTGCGGGAAATGGCGGAACGTCCCCGGGGACTAATTTTGGTCACAG
GACAAACTGGGTCGGGTAAAACCACCACTTTGGCGGCAATTTTGGACTTAATCAACCGTACCAGGGCGGAGCATATCCTC
ACCATTGAAGACCCGATTGAGTATGTTTTTCCCAATGTCCGCAGTTTGTTTCACCAGCGGCAACGGGGGGAAGACACCAA
AAGTTTTGCCAATGCTCTCCGGGAAGATCCGGACATCGTTCTGGTGGGGGAATTGCGGGACTTAGAAACCATCGCCCTCG
CCATCACTGCGGCGGAAACCGGGCACTTGGTGTTTGGGACTCTGCACACCAATTCTGCGGCTAGTACTATCGACCGGATG
TTGGATGTATTCCCCGCTAATCAGCAAGCCCAAATCCGAGCCATGTTGTCAAACTCTTTGCTGGCAGTGTTTGCCCAAAA
CCTAGTTAAGAAAAAGGCGCCCAAACCCGGCGAGTTCGGCCGAGCGTTAGTGCAGGAAATTATGGTCATCACTCCGGCGA
TCGCCAACTTAATTCGGGAAGGCAAAGCAGCCCAGATTTATTCTGCCATTCAAACCGGAGCCAAGTTGGGTATGCAAACC
ATGGAACAAGGCCTGGCCACGTTGGTGGTGTCTGGGGTAATTTCCTTGGAAGAAGGTTTGGCTAAAAGTGGTAAGCCGGA
CGAACTCCAACGGCTGATCGGTGGTATGGCTCCCCAGGCGGCAGCTAAACGCCGCTAG
ATGGCTTTGGAATACATGATCGAAGACCTCATGGAGCAGTTGGTGGAAATGGGTGGCTCCGATATGCATATCCAGGCGGG
GGCGCCGGTCTATTTCCGGGTGAGTGGTAAATTAGAACCCATCAATGAAGAAGTCTTAACTCCCCAGGAAAGCCAAAAGT
TAATCTTTAGCATGCTCAACAATTCCCAGCGGAAAGAACTGGAACAAAATTGGGAGTTAGACTGTTCCTATGGCGTTAAG
GGGTTGGCTCGCTTTCGGATCAATGTGTACAAAGAACGGGGGTGCTACGCCGCCTGCCTACGGGCCCTTTCCTCCAAAAT
TCCTAACTTTGAGCAACTGGGACTGCCCAACATTGTGCGGGAAATGGCGGAACGTCCCCGGGGACTAATTTTGGTCACAG
GACAAACTGGGTCGGGTAAAACCACCACTTTGGCGGCAATTTTGGACTTAATCAACCGTACCAGGGCGGAGCATATCCTC
ACCATTGAAGACCCGATTGAGTATGTTTTTCCCAATGTCCGCAGTTTGTTTCACCAGCGGCAACGGGGGGAAGACACCAA
AAGTTTTGCCAATGCTCTCCGGGAAGATCCGGACATCGTTCTGGTGGGGGAATTGCGGGACTTAGAAACCATCGCCCTCG
CCATCACTGCGGCGGAAACCGGGCACTTGGTGTTTGGGACTCTGCACACCAATTCTGCGGCTAGTACTATCGACCGGATG
TTGGATGTATTCCCCGCTAATCAGCAAGCCCAAATCCGAGCCATGTTGTCAAACTCTTTGCTGGCAGTGTTTGCCCAAAA
CCTAGTTAAGAAAAAGGCGCCCAAACCCGGCGAGTTCGGCCGAGCGTTAGTGCAGGAAATTATGGTCATCACTCCGGCGA
TCGCCAACTTAATTCGGGAAGGCAAAGCAGCCCAGATTTATTCTGCCATTCAAACCGGAGCCAAGTTGGGTATGCAAACC
ATGGAACAAGGCCTGGCCACGTTGGTGGTGTCTGGGGTAATTTCCTTGGAAGAAGGTTTGGCTAAAAGTGGTAAGCCGGA
CGAACTCCAACGGCTGATCGGTGGTATGGCTCCCCAGGCGGCAGCTAAACGCCGCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain Lp02 |
53.754 |
91.233 |
0.49 |
| pilT | Legionella pneumophila strain ERS1305867 |
53.754 |
91.233 |
0.49 |
| pilT | Pseudomonas aeruginosa PAK |
50.432 |
95.068 |
0.479 |
| pilT | Acinetobacter baylyi ADP1 |
50.144 |
95.068 |
0.477 |
| pilT | Acinetobacter nosocomialis M2 |
49.856 |
95.068 |
0.474 |
| pilT | Acinetobacter baumannii strain A118 |
49.856 |
95.068 |
0.474 |
| pilT | Acinetobacter baumannii D1279779 |
49.856 |
95.068 |
0.474 |
| pilT | Pseudomonas stutzeri DSM 10701 |
49.28 |
95.068 |
0.468 |
| pilT | Vibrio cholerae strain A1552 |
50.147 |
93.425 |
0.468 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.147 |
93.425 |
0.468 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
46.857 |
95.89 |
0.449 |
| pilT | Neisseria gonorrhoeae MS11 |
48.657 |
91.781 |
0.447 |
| pilT | Neisseria meningitidis 8013 |
48.657 |
91.781 |
0.447 |
| pilU | Pseudomonas stutzeri DSM 10701 |
37.892 |
96.164 |
0.364 |