Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | DQL20_RS01290 | Genome accession | NZ_LS483444 |
| Coordinates | 216191..216508 (+) | Length | 105 a.a. |
| NCBI ID | WP_006595136.1 | Uniprot ID | E7S7S9 |
| Organism | Streptococcus australis strain NCTC13166 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 211191..221508
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL20_RS01265 (NCTC11371_00251) | - | 211240..212487 (+) | 1248 | WP_006597122.1 | glycosyltransferase family 2 protein | - |
| DQL20_RS01270 (NCTC11371_00252) | - | 212496..213599 (+) | 1104 | WP_006595140.1 | glycosyl hydrolase family 8 | - |
| DQL20_RS01275 (NCTC11371_00253) | - | 213806..214183 (+) | 378 | WP_006595139.1 | DUF1033 family protein | - |
| DQL20_RS01280 (NCTC11371_00254) | comYA | 214289..215230 (+) | 942 | WP_006597118.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQL20_RS01285 (NCTC11371_00255) | comYB | 215163..216194 (+) | 1032 | WP_408022506.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQL20_RS01290 (NCTC11371_00256) | comGC/cglC | 216191..216508 (+) | 318 | WP_006595136.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQL20_RS01295 | comGD | 216477..216902 (+) | 426 | WP_040802795.1 | competence type IV pilus minor pilin ComGD | - |
| DQL20_RS01300 (NCTC11371_00258) | comGE | 216868..217161 (+) | 294 | WP_006595134.1 | competence type IV pilus minor pilin ComGE | - |
| DQL20_RS01305 (NCTC11371_00259) | comGF/cglF | 217145..217597 (+) | 453 | WP_040803180.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQL20_RS01310 (NCTC11371_00260) | comGG | 217563..218009 (+) | 447 | WP_006595132.1 | competence type IV pilus minor pilin ComGG | - |
| DQL20_RS01315 (NCTC11371_00261) | comYH | 218041..218994 (+) | 954 | WP_006597125.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQL20_RS01320 (NCTC11371_00262) | - | 219043..220239 (+) | 1197 | WP_006595130.1 | acetate kinase | - |
| DQL20_RS01325 (NCTC11371_00263) | - | 220385..221074 (+) | 690 | WP_006595129.1 | CPBP family intramembrane glutamic endopeptidase | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11670.58 Da Isoelectric Point: 9.4679
>NTDB_id=1141714 DQL20_RS01290 WP_006595136.1 216191..216508(+) (comGC/cglC) [Streptococcus australis strain NCTC13166]
MKSLHTLKVKAFTLIEMLVVLLIISVLLLLFVPNLTKQKDSVTDTGNRAVVKVVESQAELYELNHQNEKASLSKLVAEGQ
ITQKQAEAYRAHYVKNAGDHRAVGD
MKSLHTLKVKAFTLIEMLVVLLIISVLLLLFVPNLTKQKDSVTDTGNRAVVKVVESQAELYELNHQNEKASLSKLVAEGQ
ITQKQAEAYRAHYVKNAGDHRAVGD
Nucleotide
Download Length: 318 bp
>NTDB_id=1141714 DQL20_RS01290 WP_006595136.1 216191..216508(+) (comGC/cglC) [Streptococcus australis strain NCTC13166]
ATGAAATCATTGCATACACTCAAAGTAAAAGCTTTTACACTGATTGAAATGTTAGTTGTTTTGCTCATTATCAGCGTTCT
TCTCTTGCTCTTTGTTCCGAACTTGACCAAGCAGAAAGATTCGGTAACAGATACAGGAAATCGAGCAGTCGTCAAAGTCG
TGGAGAGCCAGGCTGAGCTCTATGAACTCAATCATCAGAATGAAAAAGCTAGTCTTTCTAAGCTAGTCGCAGAAGGACAA
ATCACTCAAAAACAAGCAGAAGCCTACCGTGCTCACTATGTGAAGAATGCAGGTGATCACCGTGCGGTTGGAGATTAA
ATGAAATCATTGCATACACTCAAAGTAAAAGCTTTTACACTGATTGAAATGTTAGTTGTTTTGCTCATTATCAGCGTTCT
TCTCTTGCTCTTTGTTCCGAACTTGACCAAGCAGAAAGATTCGGTAACAGATACAGGAAATCGAGCAGTCGTCAAAGTCG
TGGAGAGCCAGGCTGAGCTCTATGAACTCAATCATCAGAATGAAAAAGCTAGTCTTTCTAAGCTAGTCGCAGAAGGACAA
ATCACTCAAAAACAAGCAGAAGCCTACCGTGCTCACTATGTGAAGAATGCAGGTGATCACCGTGCGGTTGGAGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis SK321 |
69.524 |
100 |
0.695 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
68.571 |
100 |
0.686 |
| comGC/cglC | Streptococcus pneumoniae D39 |
66.667 |
100 |
0.667 |
| comGC/cglC | Streptococcus pneumoniae R6 |
66.667 |
100 |
0.667 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
66.667 |
100 |
0.667 |
| comYC | Streptococcus mutans UA159 |
66.667 |
100 |
0.667 |
| comYC | Streptococcus mutans UA140 |
66.667 |
100 |
0.667 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
66.667 |
100 |
0.667 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
70.526 |
90.476 |
0.638 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
58.654 |
99.048 |
0.581 |
| comYC | Streptococcus suis isolate S10 |
64.045 |
84.762 |
0.543 |
| comGC | Staphylococcus aureus MW2 |
51.282 |
74.286 |
0.381 |
| comGC | Staphylococcus aureus N315 |
51.282 |
74.286 |
0.381 |