Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQL20_RS01315 | Genome accession | NZ_LS483444 |
| Coordinates | 218041..218994 (+) | Length | 317 a.a. |
| NCBI ID | WP_006597125.1 | Uniprot ID | - |
| Organism | Streptococcus australis strain NCTC13166 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 213041..223994
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL20_RS01275 (NCTC11371_00253) | - | 213806..214183 (+) | 378 | WP_006595139.1 | DUF1033 family protein | - |
| DQL20_RS01280 (NCTC11371_00254) | comYA | 214289..215230 (+) | 942 | WP_006597118.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQL20_RS01285 (NCTC11371_00255) | comYB | 215163..216194 (+) | 1032 | WP_408022506.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQL20_RS01290 (NCTC11371_00256) | comGC/cglC | 216191..216508 (+) | 318 | WP_006595136.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQL20_RS01295 | comGD | 216477..216902 (+) | 426 | WP_040802795.1 | competence type IV pilus minor pilin ComGD | - |
| DQL20_RS01300 (NCTC11371_00258) | comGE | 216868..217161 (+) | 294 | WP_006595134.1 | competence type IV pilus minor pilin ComGE | - |
| DQL20_RS01305 (NCTC11371_00259) | comGF/cglF | 217145..217597 (+) | 453 | WP_040803180.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQL20_RS01310 (NCTC11371_00260) | comGG | 217563..218009 (+) | 447 | WP_006595132.1 | competence type IV pilus minor pilin ComGG | - |
| DQL20_RS01315 (NCTC11371_00261) | comYH | 218041..218994 (+) | 954 | WP_006597125.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQL20_RS01320 (NCTC11371_00262) | - | 219043..220239 (+) | 1197 | WP_006595130.1 | acetate kinase | - |
| DQL20_RS01325 (NCTC11371_00263) | - | 220385..221074 (+) | 690 | WP_006595129.1 | CPBP family intramembrane glutamic endopeptidase | - |
| DQL20_RS01330 (NCTC11371_00264) | folP | 221234..222190 (+) | 957 | WP_023022082.1 | dihydropteroate synthase | - |
| DQL20_RS01335 (NCTC11371_00265) | - | 222207..223511 (+) | 1305 | WP_006595127.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36071.87 Da Isoelectric Point: 4.2824
>NTDB_id=1141716 DQL20_RS01315 WP_006597125.1 218041..218994(+) (comYH) [Streptococcus australis strain NCTC13166]
MNFEKIEKAYGYLLENTQTIQNDLQTNFYDALVEQNAIYLDGQTELTLVKENNQRLKDLNLNKEEWRRSFQYLLMKAAQT
EPLQANHQFTPDGIGFLLVFLVDQLASSDQVDVLEMGSGTGNLAQTLMNNCQRSLDYLGLEIDDLLIDLAASMAEVMKAD
VNFAQGDAIRPQVLKESDVIISDLPVGYYPDDAIASRYQVASPQGHTYAHHLLIEQSLKYLKPGGIAIFLAPNDLLTSEQ
SPLLKKWMQDHAQVLAMVTLPENLFRSANLAKTIFVLRKQEEAEVQPFVYPLTDLQDQEDVMKFRESFQNWNKESEI
MNFEKIEKAYGYLLENTQTIQNDLQTNFYDALVEQNAIYLDGQTELTLVKENNQRLKDLNLNKEEWRRSFQYLLMKAAQT
EPLQANHQFTPDGIGFLLVFLVDQLASSDQVDVLEMGSGTGNLAQTLMNNCQRSLDYLGLEIDDLLIDLAASMAEVMKAD
VNFAQGDAIRPQVLKESDVIISDLPVGYYPDDAIASRYQVASPQGHTYAHHLLIEQSLKYLKPGGIAIFLAPNDLLTSEQ
SPLLKKWMQDHAQVLAMVTLPENLFRSANLAKTIFVLRKQEEAEVQPFVYPLTDLQDQEDVMKFRESFQNWNKESEI
Nucleotide
Download Length: 954 bp
>NTDB_id=1141716 DQL20_RS01315 WP_006597125.1 218041..218994(+) (comYH) [Streptococcus australis strain NCTC13166]
ATGAATTTCGAAAAAATTGAGAAAGCCTACGGCTACCTATTAGAGAATACCCAAACTATCCAAAATGATTTGCAGACCAA
CTTTTATGATGCTCTAGTTGAGCAGAATGCCATCTATCTGGATGGGCAAACAGAGTTGACTCTAGTGAAGGAAAACAACC
AGCGCCTGAAGGACTTGAACTTAAACAAGGAAGAGTGGCGTCGTTCCTTCCAGTATCTTTTGATGAAGGCTGCCCAAACA
GAGCCCCTACAGGCCAATCACCAATTTACGCCAGATGGGATTGGATTTCTTCTGGTCTTCCTAGTGGATCAGTTGGCGAG
TTCCGATCAAGTAGATGTGCTAGAAATGGGGAGTGGAACAGGGAACTTGGCCCAAACCTTGATGAACAACTGTCAGCGTT
CCTTAGATTATTTGGGCTTGGAAATTGATGATCTCTTGATTGACCTTGCGGCTAGTATGGCAGAAGTGATGAAGGCGGAT
GTGAATTTTGCCCAAGGTGATGCCATTCGTCCACAAGTTTTGAAAGAGAGCGATGTGATTATCAGCGATTTACCTGTCGG
TTATTATCCAGATGATGCCATTGCGAGTCGTTACCAGGTCGCTTCCCCTCAGGGCCACACCTATGCCCATCATTTATTGA
TTGAACAATCGCTAAAATACTTAAAGCCGGGTGGTATCGCTATTTTTCTAGCTCCGAATGATCTTTTGACGAGCGAGCAG
AGCCCTCTCCTGAAAAAATGGATGCAGGATCATGCTCAGGTCTTGGCCATGGTTACCTTGCCAGAGAACCTCTTTCGATC
AGCCAATCTAGCAAAAACCATCTTTGTTTTGCGCAAGCAAGAAGAAGCGGAGGTCCAACCATTTGTCTATCCCTTAACCG
ATTTGCAAGATCAGGAAGACGTCATGAAATTCCGTGAAAGTTTTCAAAACTGGAATAAAGAAAGTGAAATTTAA
ATGAATTTCGAAAAAATTGAGAAAGCCTACGGCTACCTATTAGAGAATACCCAAACTATCCAAAATGATTTGCAGACCAA
CTTTTATGATGCTCTAGTTGAGCAGAATGCCATCTATCTGGATGGGCAAACAGAGTTGACTCTAGTGAAGGAAAACAACC
AGCGCCTGAAGGACTTGAACTTAAACAAGGAAGAGTGGCGTCGTTCCTTCCAGTATCTTTTGATGAAGGCTGCCCAAACA
GAGCCCCTACAGGCCAATCACCAATTTACGCCAGATGGGATTGGATTTCTTCTGGTCTTCCTAGTGGATCAGTTGGCGAG
TTCCGATCAAGTAGATGTGCTAGAAATGGGGAGTGGAACAGGGAACTTGGCCCAAACCTTGATGAACAACTGTCAGCGTT
CCTTAGATTATTTGGGCTTGGAAATTGATGATCTCTTGATTGACCTTGCGGCTAGTATGGCAGAAGTGATGAAGGCGGAT
GTGAATTTTGCCCAAGGTGATGCCATTCGTCCACAAGTTTTGAAAGAGAGCGATGTGATTATCAGCGATTTACCTGTCGG
TTATTATCCAGATGATGCCATTGCGAGTCGTTACCAGGTCGCTTCCCCTCAGGGCCACACCTATGCCCATCATTTATTGA
TTGAACAATCGCTAAAATACTTAAAGCCGGGTGGTATCGCTATTTTTCTAGCTCCGAATGATCTTTTGACGAGCGAGCAG
AGCCCTCTCCTGAAAAAATGGATGCAGGATCATGCTCAGGTCTTGGCCATGGTTACCTTGCCAGAGAACCTCTTTCGATC
AGCCAATCTAGCAAAAACCATCTTTGTTTTGCGCAAGCAAGAAGAAGCGGAGGTCCAACCATTTGTCTATCCCTTAACCG
ATTTGCAAGATCAGGAAGACGTCATGAAATTCCGTGAAAGTTTTCAAAACTGGAATAAAGAAAGTGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
59.048 |
99.369 |
0.587 |
| comYH | Streptococcus mutans UA159 |
58.73 |
99.369 |
0.584 |