Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   FGL06_RS01740 Genome accession   NZ_LR594042
Coordinates   328947..329423 (+) Length   158 a.a.
NCBI ID   WP_024344741.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8133     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 323947..334423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL06_RS01740 (NCTC8133_00346) comX/sigX 328947..329423 (+) 477 WP_024344741.1 competence protein ComX Regulator
  FGL06_RS01745 (NCTC8133_00347) - 329460..330818 (-) 1359 WP_126437601.1 aspartate kinase -
  FGL06_RS01750 (NCTC8133_00348) - 330919..331575 (+) 657 WP_033151962.1 HAD family hydrolase -
  FGL06_RS01755 (NCTC8133_00349) - 331758..332546 (+) 789 WP_033151963.1 enoyl-CoA hydratase -
  FGL06_RS01760 (NCTC8133_00350) - 332662..333096 (+) 435 WP_074484027.1 MarR family winged helix-turn-helix transcriptional regulator -
  FGL06_RS01765 (NCTC8133_00351) - 333099..334073 (+) 975 WP_074480745.1 beta-ketoacyl-ACP synthase III -
  FGL06_RS01770 (NCTC8133_00352) - 334132..334356 (+) 225 WP_003067534.1 acyl carrier protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 19328.16 Da        Isoelectric Point: 8.7333

>NTDB_id=1127558 FGL06_RS01740 WP_024344741.1 328947..329423(+) (comX/sigX) [Streptococcus equinus strain NCTC8133]
MDFESYFETVKPIILKLRRHYFVKLWDYDDWIQEGRIVFFKLLQEHPEVLINEGRRYTYFKTKFSNHVKDTIRHQESFKR
KFNRMPYEEIGEISHCVPQLNFFEVADFIAYRDSLSQLKATLSLEEQEKLAKVVRGERFEGKKAFLRQIEPYFSDFKH

Nucleotide


Download         Length: 477 bp        

>NTDB_id=1127558 FGL06_RS01740 WP_024344741.1 328947..329423(+) (comX/sigX) [Streptococcus equinus strain NCTC8133]
GTGGATTTTGAAAGCTATTTTGAAACTGTAAAACCAATTATTTTAAAATTAAGACGTCATTACTTTGTGAAATTATGGGA
TTATGACGACTGGATTCAGGAAGGGCGTATTGTCTTTTTCAAACTACTGCAAGAACATCCTGAGGTTCTGATTAATGAGG
GAAGACGCTATACTTACTTCAAGACAAAATTTTCTAATCATGTAAAGGATACCATCCGCCATCAGGAATCCTTTAAACGT
AAATTTAATCGTATGCCTTATGAAGAAATAGGTGAGATTAGTCATTGTGTCCCTCAGCTTAATTTTTTTGAAGTGGCAGA
CTTTATTGCTTACCGAGATAGTTTATCTCAATTAAAAGCAACTTTAAGCTTAGAAGAGCAAGAAAAGCTAGCAAAAGTAG
TCAGAGGGGAACGATTTGAAGGGAAAAAGGCCTTCTTACGCCAAATTGAACCTTACTTTTCTGACTTTAAGCACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.