Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   FGL06_RS01470 Genome accession   NZ_LR594042
Coordinates   273011..273487 (+) Length   158 a.a.
NCBI ID   WP_024344741.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8133     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 268011..278487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL06_RS01470 (NCTC8133_00293) comX/sigX 273011..273487 (+) 477 WP_024344741.1 competence protein ComX Regulator
  FGL06_RS01475 (NCTC8133_00294) - 273686..273952 (+) 267 WP_021141631.1 ACT domain-containing protein -
  FGL06_RS01480 (NCTC8133_00295) - 273964..275301 (+) 1338 WP_024344742.1 PFL family protein -
  FGL06_RS01485 (NCTC8133_00296) - 275499..276203 (+) 705 WP_024344743.1 histidine phosphatase family protein -
  FGL06_RS01490 (NCTC8133_00297) - 276187..276960 (+) 774 WP_074639782.1 M15 family metallopeptidase -
  FGL06_RS01495 (NCTC8133_00298) - 276957..277547 (+) 591 WP_024344745.1 glycoside hydrolase family 73 protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 19328.16 Da        Isoelectric Point: 8.7333

>NTDB_id=1127554 FGL06_RS01470 WP_024344741.1 273011..273487(+) (comX/sigX) [Streptococcus equinus strain NCTC8133]
MDFESYFETVKPIILKLRRHYFVKLWDYDDWIQEGRIVFFKLLQEHPEVLINEGRRYTYFKTKFSNHVKDTIRHQESFKR
KFNRMPYEEIGEISHCVPQLNFFEVADFIAYRDSLSQLKATLSLEEQEKLAKVVRGERFEGKKAFLRQIEPYFSDFKH

Nucleotide


Download         Length: 477 bp        

>NTDB_id=1127554 FGL06_RS01470 WP_024344741.1 273011..273487(+) (comX/sigX) [Streptococcus equinus strain NCTC8133]
GTGGATTTTGAAAGCTATTTTGAAACTGTAAAACCAATTATTTTAAAATTAAGACGTCATTACTTTGTGAAATTATGGGA
TTATGACGACTGGATTCAGGAAGGGCGTATTGTCTTTTTCAAACTACTGCAAGAACATCCTGAGGTTCTGATTAATGAGG
GAAGACGCTATACTTACTTCAAGACAAAATTTTCTAATCATGTAAAGGATACCATCCGCCATCAGGAATCCTTTAAACGT
AAATTTAATCGTATGCCTTATGAAGAAATAGGTGAGATTAGTCATTGTGTCCCTCAGCTTAATTTTTTTGAAGTGGCAGA
CTTTATTGCTTACCGAGATAGTTTATCTCAATTAAAAGCAACTTTAAGCTTAGAAGAGCAAGAAAAGCTAGCAAAAGTAG
TCAGAGGGGAACGATTTGAAGGGAAAAAGGCCTTCTTACGCCAAATTGAACCTTACTTTTCTGACTTTAAGCACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.