Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ACMUEV_RS12105 | Genome accession | NZ_CP180258 |
| Coordinates | 2606159..2607262 (+) | Length | 367 a.a. |
| NCBI ID | WP_225885737.1 | Uniprot ID | - |
| Organism | Leptolyngbya sp. FACHB-1624 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2601159..2612262
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMUEV_RS12095 (ACMUEV_12090) | grpE | 2603212..2603895 (-) | 684 | WP_017288853.1 | nucleotide exchange factor GrpE | - |
| ACMUEV_RS12100 (ACMUEV_12095) | pilB/pilB1 | 2604099..2606099 (+) | 2001 | WP_017288852.1 | GspE/PulE family protein | Machinery gene |
| ACMUEV_RS12105 (ACMUEV_12100) | pilT | 2606159..2607262 (+) | 1104 | WP_225885737.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACMUEV_RS12110 (ACMUEV_12105) | - | 2607374..2608597 (+) | 1224 | WP_017288850.1 | type II secretion system F family protein | - |
| ACMUEV_RS12115 (ACMUEV_12110) | - | 2608707..2609285 (+) | 579 | WP_190652034.1 | hypothetical protein | - |
| ACMUEV_RS12120 (ACMUEV_12115) | - | 2609331..2609810 (-) | 480 | WP_190652033.1 | ferredoxin | - |
| ACMUEV_RS12125 (ACMUEV_12120) | - | 2609811..2610197 (-) | 387 | WP_190652032.1 | DUF1257 domain-containing protein | - |
| ACMUEV_RS12130 (ACMUEV_12125) | - | 2610240..2610449 (-) | 210 | WP_017288846.1 | DUF2997 domain-containing protein | - |
Sequence
Protein
Download Length: 367 a.a. Molecular weight: 40471.63 Da Isoelectric Point: 7.1626
>NTDB_id=1094889 ACMUEV_RS12105 WP_225885737.1 2606159..2607262(+) (pilT) [Leptolyngbya sp. FACHB-1624]
MMIEDLMEQLIEMGGSDMHLTAGLPPYFRISGHLQPVSDHVLSAEECQRLIFSMLNNTQRKTLEQNWELDCSYGVRGLAR
FRVNVYKDRGTYAACLRALSSKIPNFEKLNLPDVVREMSEKPRGLILVTGPTGSGKTTTLAAMIDLINRTRAEHILTIED
PIEFVYEPIKSLVHQRQLHEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVDRM
IDVFPSERQTQVRVQLSNSLVAVFSQTLVPKKNPKPGEYGRVMAQEIMIVTPAIANLIREGKTAQIYSAIQTGGKLGMQT
LEKVLADQYKAGLITFEAAASKTSRPDELQRLIGGVPNGAAGTAVKR
MMIEDLMEQLIEMGGSDMHLTAGLPPYFRISGHLQPVSDHVLSAEECQRLIFSMLNNTQRKTLEQNWELDCSYGVRGLAR
FRVNVYKDRGTYAACLRALSSKIPNFEKLNLPDVVREMSEKPRGLILVTGPTGSGKTTTLAAMIDLINRTRAEHILTIED
PIEFVYEPIKSLVHQRQLHEDTKSFANALKAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVDRM
IDVFPSERQTQVRVQLSNSLVAVFSQTLVPKKNPKPGEYGRVMAQEIMIVTPAIANLIREGKTAQIYSAIQTGGKLGMQT
LEKVLADQYKAGLITFEAAASKTSRPDELQRLIGGVPNGAAGTAVKR
Nucleotide
Download Length: 1104 bp
>NTDB_id=1094889 ACMUEV_RS12105 WP_225885737.1 2606159..2607262(+) (pilT) [Leptolyngbya sp. FACHB-1624]
ATGATGATCGAAGACTTGATGGAACAACTCATCGAAATGGGCGGTTCTGACATGCACCTGACCGCAGGACTGCCGCCTTA
TTTTCGCATCAGCGGACATCTTCAACCCGTCAGCGATCATGTTCTCAGTGCAGAAGAATGTCAGCGTTTGATTTTCAGTA
TGCTGAATAACACTCAGCGCAAAACACTAGAGCAAAACTGGGAGCTTGACTGCTCTTATGGTGTGCGCGGATTAGCTCGT
TTTCGGGTCAATGTCTACAAAGATCGCGGAACTTACGCTGCATGTCTACGGGCACTCAGTTCCAAAATTCCAAATTTTGA
AAAACTGAATCTTCCCGATGTCGTTCGAGAAATGTCCGAAAAGCCAAGAGGATTAATCTTAGTTACAGGTCCTACCGGTT
CAGGTAAGACAACGACTTTAGCTGCAATGATTGATTTGATCAACCGCACTCGTGCAGAACATATTTTGACGATCGAAGAT
CCGATCGAATTTGTATACGAACCTATCAAAAGTTTGGTTCACCAACGCCAGCTTCATGAAGATACAAAGAGCTTTGCAAA
TGCTCTAAAAGCAGCTCTCCGGGAAGATCCAGATATTATTCTGGTTGGGGAAATGCGGGACTTGGAAACTATCTCACTAG
CAATTTCTGCGGCAGAAACAGGTCACTTAGTTTTCGGCACGCTCCATACGAGTTCTGCGGCACAAACCGTTGACCGGATG
ATTGATGTCTTTCCATCCGAGCGTCAAACGCAAGTGCGGGTGCAGCTTTCCAACTCACTCGTTGCAGTCTTCAGCCAAAC
GCTGGTGCCGAAGAAGAATCCCAAACCGGGTGAATATGGGCGAGTCATGGCTCAGGAAATTATGATTGTCACCCCTGCGA
TCGCCAACCTGATTCGTGAAGGGAAAACCGCCCAAATTTACTCAGCAATTCAGACAGGCGGAAAATTGGGAATGCAAACC
CTTGAAAAAGTGCTAGCTGATCAATACAAAGCTGGACTAATTACATTTGAAGCCGCCGCCTCTAAAACTTCTCGTCCTGA
TGAACTTCAGCGCTTAATTGGTGGAGTTCCGAATGGTGCAGCAGGCACAGCAGTGAAGCGCTAA
ATGATGATCGAAGACTTGATGGAACAACTCATCGAAATGGGCGGTTCTGACATGCACCTGACCGCAGGACTGCCGCCTTA
TTTTCGCATCAGCGGACATCTTCAACCCGTCAGCGATCATGTTCTCAGTGCAGAAGAATGTCAGCGTTTGATTTTCAGTA
TGCTGAATAACACTCAGCGCAAAACACTAGAGCAAAACTGGGAGCTTGACTGCTCTTATGGTGTGCGCGGATTAGCTCGT
TTTCGGGTCAATGTCTACAAAGATCGCGGAACTTACGCTGCATGTCTACGGGCACTCAGTTCCAAAATTCCAAATTTTGA
AAAACTGAATCTTCCCGATGTCGTTCGAGAAATGTCCGAAAAGCCAAGAGGATTAATCTTAGTTACAGGTCCTACCGGTT
CAGGTAAGACAACGACTTTAGCTGCAATGATTGATTTGATCAACCGCACTCGTGCAGAACATATTTTGACGATCGAAGAT
CCGATCGAATTTGTATACGAACCTATCAAAAGTTTGGTTCACCAACGCCAGCTTCATGAAGATACAAAGAGCTTTGCAAA
TGCTCTAAAAGCAGCTCTCCGGGAAGATCCAGATATTATTCTGGTTGGGGAAATGCGGGACTTGGAAACTATCTCACTAG
CAATTTCTGCGGCAGAAACAGGTCACTTAGTTTTCGGCACGCTCCATACGAGTTCTGCGGCACAAACCGTTGACCGGATG
ATTGATGTCTTTCCATCCGAGCGTCAAACGCAAGTGCGGGTGCAGCTTTCCAACTCACTCGTTGCAGTCTTCAGCCAAAC
GCTGGTGCCGAAGAAGAATCCCAAACCGGGTGAATATGGGCGAGTCATGGCTCAGGAAATTATGATTGTCACCCCTGCGA
TCGCCAACCTGATTCGTGAAGGGAAAACCGCCCAAATTTACTCAGCAATTCAGACAGGCGGAAAATTGGGAATGCAAACC
CTTGAAAAAGTGCTAGCTGATCAATACAAAGCTGGACTAATTACATTTGAAGCCGCCGCCTCTAAAACTTCTCGTCCTGA
TGAACTTCAGCGCTTAATTGGTGGAGTTCCGAATGGTGCAGCAGGCACAGCAGTGAAGCGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
54.441 |
95.095 |
0.518 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.582 |
95.095 |
0.51 |
| pilT | Acinetobacter baylyi ADP1 |
52.149 |
95.095 |
0.496 |
| pilT | Legionella pneumophila strain ERS1305867 |
52.161 |
94.55 |
0.493 |
| pilT | Legionella pneumophila strain Lp02 |
52.161 |
94.55 |
0.493 |
| pilT | Acinetobacter baumannii strain A118 |
51.576 |
95.095 |
0.49 |
| pilT | Acinetobacter nosocomialis M2 |
51.576 |
95.095 |
0.49 |
| pilT | Acinetobacter baumannii D1279779 |
51.576 |
95.095 |
0.49 |
| pilT | Neisseria gonorrhoeae MS11 |
51.622 |
92.371 |
0.477 |
| pilT | Neisseria meningitidis 8013 |
51.327 |
92.371 |
0.474 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
47.383 |
98.91 |
0.469 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.415 |
93.188 |
0.46 |
| pilT | Vibrio cholerae strain A1552 |
49.415 |
93.188 |
0.46 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.295 |
100 |
0.395 |