Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | ACF8MK_RS12255 | Genome accession | NZ_CP171154 |
| Coordinates | 2821692..2822123 (-) | Length | 143 a.a. |
| NCBI ID | WP_392538959.1 | Uniprot ID | - |
| Organism | Legionella sp. 227 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2816692..2827123
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF8MK_RS12235 (ACF8MK_12235) | - | 2816972..2819083 (+) | 2112 | WP_392536896.1 | hypothetical protein | - |
| ACF8MK_RS12240 (ACF8MK_12240) | - | 2819095..2820501 (-) | 1407 | WP_392536897.1 | APC family permease | - |
| ACF8MK_RS12245 (ACF8MK_12245) | - | 2820745..2821089 (-) | 345 | WP_392536898.1 | hypothetical protein | - |
| ACF8MK_RS12250 (ACF8MK_12250) | - | 2821296..2821625 (-) | 330 | WP_392536899.1 | BolA family protein | - |
| ACF8MK_RS12255 (ACF8MK_12255) | pilA2 | 2821692..2822123 (-) | 432 | WP_392538959.1 | pilin | Machinery gene |
| ACF8MK_RS12260 (ACF8MK_12260) | - | 2822432..2823670 (-) | 1239 | WP_265704355.1 | 6-phosphofructokinase | - |
| ACF8MK_RS12265 (ACF8MK_12265) | letS | 2823747..2826479 (-) | 2733 | WP_392536900.1 | two-component system sensor histidine kinase LetS | Regulator |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 14793.99 Da Isoelectric Point: 4.8016
>NTDB_id=1060340 ACF8MK_RS12255 WP_392538959.1 2821692..2822123(-) (pilA2) [Legionella sp. 227]
MKQKGFTLIELMIVVAIVGILAAIAIPAYQDYVVRARVTEGLSLASSAQTTISENATTGANALDLGWAQPPATANVQSVV
VTPATGVITVTYTALANNVVLTLTPSSNGQPLVAGTPPTNPITWTCAVQNAADDRYVPANCRI
MKQKGFTLIELMIVVAIVGILAAIAIPAYQDYVVRARVTEGLSLASSAQTTISENATTGANALDLGWAQPPATANVQSVV
VTPATGVITVTYTALANNVVLTLTPSSNGQPLVAGTPPTNPITWTCAVQNAADDRYVPANCRI
Nucleotide
Download Length: 432 bp
>NTDB_id=1060340 ACF8MK_RS12255 WP_392538959.1 2821692..2822123(-) (pilA2) [Legionella sp. 227]
ATGAAACAAAAAGGCTTTACTTTAATTGAGTTGATGATAGTGGTAGCAATCGTTGGTATTCTTGCCGCAATTGCTATTCC
AGCCTATCAGGACTACGTTGTTAGAGCTCGTGTAACAGAAGGATTAAGTCTTGCCTCTTCAGCACAGACTACTATTTCTG
AAAATGCGACAACGGGTGCTAATGCTTTAGACTTGGGTTGGGCTCAACCCCCAGCAACAGCTAACGTGCAAAGTGTTGTG
GTTACTCCAGCTACTGGCGTAATTACAGTTACTTATACTGCATTAGCAAATAATGTGGTCCTTACATTAACTCCATCATC
TAATGGACAACCCCTGGTTGCAGGAACACCGCCTACAAATCCAATTACCTGGACTTGTGCAGTACAAAATGCTGCTGATG
ATAGATATGTTCCTGCAAACTGCAGAATCTAA
ATGAAACAAAAAGGCTTTACTTTAATTGAGTTGATGATAGTGGTAGCAATCGTTGGTATTCTTGCCGCAATTGCTATTCC
AGCCTATCAGGACTACGTTGTTAGAGCTCGTGTAACAGAAGGATTAAGTCTTGCCTCTTCAGCACAGACTACTATTTCTG
AAAATGCGACAACGGGTGCTAATGCTTTAGACTTGGGTTGGGCTCAACCCCCAGCAACAGCTAACGTGCAAAGTGTTGTG
GTTACTCCAGCTACTGGCGTAATTACAGTTACTTATACTGCATTAGCAAATAATGTGGTCCTTACATTAACTCCATCATC
TAATGGACAACCCCTGGTTGCAGGAACACCGCCTACAAATCCAATTACCTGGACTTGTGCAGTACAAAATGCTGCTGATG
ATAGATATGTTCCTGCAAACTGCAGAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
53.691 |
100 |
0.559 |
| pilA2 | Legionella pneumophila str. Paris |
53.02 |
100 |
0.552 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
50.318 |
100 |
0.552 |
| comP | Acinetobacter baylyi ADP1 |
42.405 |
100 |
0.469 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
39.877 |
100 |
0.455 |
| pilA/pilA1 | Eikenella corrodens VA1 |
39.752 |
100 |
0.448 |
| pilE | Neisseria gonorrhoeae MS11 |
36.42 |
100 |
0.413 |
| pilA | Acinetobacter baumannii strain A118 |
36.913 |
100 |
0.385 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
33.333 |
100 |
0.385 |
| pilA | Pseudomonas aeruginosa PAK |
34.839 |
100 |
0.378 |
| pilA | Vibrio campbellii strain DS40M4 |
36.054 |
100 |
0.371 |
| pilA | Haemophilus influenzae Rd KW20 |
36.364 |
100 |
0.364 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
35.374 |
100 |
0.364 |