Detailed information
Bioinformatically predicted
Overview
| Name | comEC | Type | Machinery gene |
| Locus tag | QUD44_RS02130 | Genome accession | NZ_AP027275 |
| Coordinates | 430629..430970 (+) | Length | 113 a.a. |
| NCBI ID | WP_286210757.1 | Uniprot ID | - |
| Organism | Lactococcus formosensis strain MS200408A | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 425629..435970
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUD44_RS02110 (LFMS200408A_04090) | - | 426867..428042 (+) | 1176 | WP_096368625.1 | SLC13 family permease | - |
| QUD44_RS02115 (LFMS200408A_04100) | - | 428100..428741 (+) | 642 | WP_096368624.1 | helix-hairpin-helix domain-containing protein | - |
| QUD44_RS02120 (LFMS200408A_04110) | - | 428761..430257 (+) | 1497 | WP_286210755.1 | ComEC/Rec2 family competence protein | - |
| QUD44_RS02125 (LFMS200408A_04120) | comEC | 430224..430628 (+) | 405 | WP_286210756.1 | MBL fold metallo-hydrolase | Machinery gene |
| QUD44_RS02130 (LFMS200408A_04130) | comEC | 430629..430970 (+) | 342 | WP_286210757.1 | MBL fold metallo-hydrolase | Machinery gene |
| QUD44_RS02135 (LFMS200408A_04140) | - | 431125..431901 (+) | 777 | WP_185767510.1 | alpha/beta hydrolase family protein | - |
| QUD44_RS02140 (LFMS200408A_04150) | - | 432097..432312 (+) | 216 | WP_003135074.1 | F0F1 ATP synthase subunit C | - |
| QUD44_RS02145 (LFMS200408A_04160) | atpB | 432367..433080 (+) | 714 | WP_017368853.1 | F0F1 ATP synthase subunit A | - |
| QUD44_RS02150 (LFMS200408A_04170) | atpF | 433094..433600 (+) | 507 | WP_017368854.1 | F0F1 ATP synthase subunit B | - |
| QUD44_RS02155 (LFMS200408A_04180) | - | 433615..434142 (+) | 528 | WP_017368855.1 | F0F1 ATP synthase subunit delta | - |
| QUD44_RS02160 (LFMS200408A_04190) | atpA | 434208..435716 (+) | 1509 | WP_004259170.1 | F0F1 ATP synthase subunit alpha | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12846.78 Da Isoelectric Point: 10.2217
>NTDB_id=100576 QUD44_RS02130 WP_286210757.1 430629..430970(+) (comEC) [Lactococcus formosensis strain MS200408A]
MTFGEFYGKKFLFTGDLEEEGEAKLQKGYPHLEVDILKVGHHGSKTSTKEGFLEAIKPKIALISAGKNNRYKHPSQETLH
QLTARGIKIYRTDQQGAIRLLYKKGSWQIQTVK
MTFGEFYGKKFLFTGDLEEEGEAKLQKGYPHLEVDILKVGHHGSKTSTKEGFLEAIKPKIALISAGKNNRYKHPSQETLH
QLTARGIKIYRTDQQGAIRLLYKKGSWQIQTVK
Nucleotide
Download Length: 342 bp
>NTDB_id=100576 QUD44_RS02130 WP_286210757.1 430629..430970(+) (comEC) [Lactococcus formosensis strain MS200408A]
GTGACATTTGGTGAATTTTATGGGAAGAAATTTCTTTTTACAGGTGACTTAGAAGAAGAGGGAGAGGCTAAACTCCAGAA
AGGATATCCACATTTAGAGGTTGATATCCTAAAAGTTGGACATCACGGCAGTAAGACTTCTACAAAGGAAGGTTTTTTAG
AAGCGATTAAGCCTAAGATTGCTCTTATTTCTGCTGGAAAAAATAATCGATATAAACATCCGAGTCAAGAGACGCTTCAC
CAATTAACTGCACGAGGAATAAAAATTTATCGGACAGACCAGCAAGGAGCGATCCGTCTCCTATATAAAAAAGGCAGCTG
GCAAATTCAAACAGTAAAGTAA
GTGACATTTGGTGAATTTTATGGGAAGAAATTTCTTTTTACAGGTGACTTAGAAGAAGAGGGAGAGGCTAAACTCCAGAA
AGGATATCCACATTTAGAGGTTGATATCCTAAAAGTTGGACATCACGGCAGTAAGACTTCTACAAAGGAAGGTTTTTTAG
AAGCGATTAAGCCTAAGATTGCTCTTATTTCTGCTGGAAAAAATAATCGATATAAACATCCGAGTCAAGAGACGCTTCAC
CAATTAACTGCACGAGGAATAAAAATTTATCGGACAGACCAGCAAGGAGCGATCCGTCTCCTATATAAAAAAGGCAGCTG
GCAAATTCAAACAGTAAAGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEC | Lactococcus lactis subsp. cremoris KW2 |
60.177 |
100 |
0.602 |
| comEC/celB | Streptococcus mitis SK321 |
54.783 |
100 |
0.558 |
| comEC/celB | Streptococcus mitis NCTC 12261 |
55.263 |
100 |
0.558 |
| comEC/celB | Streptococcus pneumoniae Rx1 |
53.043 |
100 |
0.54 |
| comEC/celB | Streptococcus pneumoniae D39 |
53.043 |
100 |
0.54 |
| comEC/celB | Streptococcus pneumoniae R6 |
53.043 |
100 |
0.54 |
| comEC/celB | Streptococcus pneumoniae TIGR4 |
53.043 |
100 |
0.54 |
| comEC | Latilactobacillus sakei subsp. sakei 23K |
49.524 |
92.92 |
0.46 |
| comEC | Bacillus subtilis subsp. subtilis str. 168 |
51.546 |
85.841 |
0.442 |
| comEC | Staphylococcus aureus MW2 |
46 |
88.496 |
0.407 |
| comEC | Staphylococcus aureus N315 |
46 |
88.496 |
0.407 |
| comA/comEC | Thermus thermophilus HB27 |
43.878 |
86.726 |
0.381 |
| comA/comEC | Acinetobacter baylyi ADP1 |
42.857 |
86.726 |
0.372 |
| comA/comEC | Acinetobacter baumannii strain A118 |
45.161 |
82.301 |
0.372 |
| comA/comEC | Acinetobacter baumannii D1279779 |
45.161 |
82.301 |
0.372 |
| comA | Neisseria gonorrhoeae MS11 |
39.252 |
94.69 |
0.372 |