Salmonella enterica subsp. enterica serovar Dublin strain RM1041

TA loci of Salmonella enterica subsp. enterica serovar Dublin strain RM104

Number of TA loci: experimental0; insolico19

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA270672 - Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS00935 (tacT) PQP85_RS00930 (tacA) tacAT/DUF1778(antitoxin)
in_silico TA270673 Prophage Prophage Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS01420 (doc) PQP85_RS01415 (phd) phd-doc/Doc-RelB
in_silico TA270674 - Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS01625 (yafQ) PQP85_RS01620 (dinJ) DinJ-YafQ (relBE)/YafQ-RelB
in_silico TA270676 GI Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS04040 (vapC) PQP85_RS04035 (vapB) vapBC/VapC-VagC
in_silico TA270677 IS/Tn Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS04730 (TacT3) PQP85_RS04735 (TacA3) tacAT/DUF1778(antitoxin)
in_silico TA270682 - Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS17675 (Hha) PQP85_RS17670 (TomB) Hha-TomB/-
in_silico TA270685 - Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS20450 (shpA) PQP85_RS20445 (shpB) shpAB/BrnT-BrnA
in_silico TA270686 IScluster/Tn GI Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS20685 (ccdB) PQP85_RS20690 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA270687 - Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS20900 (relE) PQP85_RS20905 (relB) relBE/ParE-RelB
in_silico TA270688 - Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS21475 (TacT2) PQP85_RS21480 (TacA2) tacAT/DUF1778(antitoxin)
in_silico TA270689 - Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS22815 (higB) PQP85_RS22810 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA270690 - Salmonella enterica subsp. enterica serovar Dublin strain RM104 (chromosome) NZ_CP117346 PQP85_RS22825 (higB) PQP85_RS22830 (higA) higBA (relBE)/HigB-HigA
in_silico TA270691 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM104 (plasmid pRM104_1) NZ_CP117347 PQP85_RS24165 (relE) PQP85_RS24160 (relB) relBE/ParE-DnaT
in_silico TA270692 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM104 (plasmid pRM104_1) NZ_CP117347 PQP85_RS24450 (vagD) PQP85_RS24455 (vagC) vagCD/VapC-VagC
in_silico TA270693 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM104 (plasmid pRM104_1) NZ_CP117347 PQP85_RS24465 (ccdB) PQP85_RS24460 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA270694 Plasmid Salmonella enterica subsp. enterica serovar Dublin strain RM104 (plasmid pRM104_1) NZ_CP117347 PQP85_RS24620 (higB) PQP85_RS24625 (higA) higBA (relBE)/COG4683-HTH_37
experimentalExperimentally validated     insolicoBioinformatically predicted