MGE detailed information
MGE type: IScluster/Tn MGE length: 3104 bp
Accession: NZ_CP117346 Location: 4195471..4198574 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM104 Replicon: chromosome
Accession: NZ_CP117346 Location: 4195471..4198574 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP85_RS20655 (4190760) | 4190760..4191206 | - | 447 | WP_001077813.1 | SEF18 fimbria major subunit SefD | - |
| PQP85_RS20660 (4191203) | 4191203..4193647 | - | 2445 | WP_000753927.1 | SEF14/SEF18 fimbria usher protein SefC | - |
| PQP85_RS20665 (4193664) | 4193664..4194404 | - | 741 | WP_001575372.1 | SEF14/SEF18 fimbria chaperone SefB | - |
| PQP85_RS20670 (4194526) | 4194526..4195056 | - | 531 | WP_000909460.1 | SEF14 fimbria major subunit SefA | - |
| PQP85_RS20675 (4195379) | 4195379..4196512 | + | 1134 | Protein_4047 | IS3 family transposase | - |
| PQP85_RS20680 (4196544) | 4196544..4196684 | - | 141 | Protein_4048 | Arm DNA-binding domain-containing protein | - |
| PQP85_RS20685 (4197090) | 4197090..4197398 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PQP85_RS20690 (4197401) | 4197401..4197640 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PQP85_RS20695 (4197749) | 4197749..4197997 | - | 249 | WP_000168389.1 | ribbon-helix-helix domain-containing protein | - |
| PQP85_RS20700 (4198188) | 4198188..4198619 | - | 432 | Protein_4052 | IS630 family transposase ISEc33 | Transposase |
| PQP85_RS20710 (4199376) | 4199376..4200395 | + | 1020 | WP_000152558.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PQP85_RS20715 (4200423) | 4200423..4200953 | - | 531 | WP_000896758.1 | gluconokinase | - |
| PQP85_RS20720 (4201170) | 4201170..4202201 | + | 1032 | WP_000453348.1 | L-idonate 5-dehydrogenase | - |
| PQP85_RS20725 (4202226) | 4202226..4202990 | + | 765 | WP_001061034.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|