MGE detailed information
MGE type: Genomic_island MGE length: 11363 bp
Accession: NZ_CP117346 Location: 833669..845031 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM104 Replicon: chromosome
Accession: NZ_CP117346 Location: 833669..845031 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP85_RS04000 (829115) | 829115..830213 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PQP85_RS04005 (830223) | 830223..831740 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQP85_RS04010 (831816) | 831816..832361 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQP85_RS04015 (832626) | 832626..833384 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PQP85_RS04025 (833669) | 833669..834475 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| PQP85_RS04030 (834755) | 834755..835006 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| PQP85_RS04035 (835215) | 835215..835442 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQP85_RS04040 (835442) | 835442..835840 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQP85_RS04045 (836649) | 836649..837185 | + | 537 | WP_001038502.1 | FMN-dependent NADH-azoreductase | VF |
| PQP85_RS04050 (837232) | 837232..837864 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQP85_RS04055 (838583) | 838583..839164 | + | 582 | WP_001244651.1 | hypothetical protein | VF |
| PQP85_RS04060 (839284) | 839284..841773 | + | 2490 | WP_000705504.1 | hypothetical protein | VF |
| PQP85_RS04065 (841814) | 841814..842557 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| PQP85_RS04070 (842554) | 842554..843630 | + | 1077 | WP_000141331.1 | hypothetical protein | - |
| PQP85_RS04075 (843774) | 843774..844286 | + | 513 | WP_000336258.1 | CaiF/GrlA family transcriptional regulator | - |
| PQP85_RS04080 (844273) | 844273..845031 | + | 759 | WP_000134794.1 | transcriptional regulator | - |
| PQP85_RS04085 (845241) | 845241..846137 | - | 897 | WP_000503673.1 | nickel/cobalt efflux protein RcnA | - |
| PQP85_RS04090 (846258) | 846258..846530 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQP85_RS04095 (846561) | 846561..847790 | - | 1230 | WP_000036836.1 | amino acid permease | - |
| PQP85_RS04100 (847932) | 847932..848387 | - | 456 | WP_001574932.1 | multidrug/biocide efflux PACE transporter | - |
| PQP85_RS04105 (848491) | 848491..849354 | + | 864 | WP_001270781.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.008 |