MGE detailed information
MGE type: Genomic_island MGE length: 19640 bp
Accession: NZ_CP117346 Location: 4178358..4197997 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM104 Replicon: chromosome
Accession: NZ_CP117346 Location: 4178358..4197997 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP85_RS20565 (4173636) | 4173636..4174166 | - | 531 | WP_000907670.1 | Hcp family type VI secretion system effector | - |
| PQP85_RS20570 (4174884) | 4174884..4175897 | + | 1014 | WP_001094620.1 | tryptophan--tRNA ligase | - |
| PQP85_RS20575 (4175898) | 4175898..4176671 | - | 774 | WP_000841654.1 | Uxu operon transcriptional regulator | - |
| PQP85_RS20580 (4177021) | 4177021..4177695 | + | 675 | WP_000588701.1 | dienelactone hydrolase family protein | - |
| PQP85_RS20585 (4177692) | 4177692..4178153 | - | 462 | WP_001642121.1 | DUF302 domain-containing protein | - |
| PQP85_RS20590 (4178358) | 4178358..4179269 | - | 912 | WP_000556778.1 | hypothetical protein | - |
| PQP85_RS20595 (4179623) | 4179623..4180231 | - | 609 | WP_000864861.1 | DUF1062 domain-containing protein | - |
| PQP85_RS20600 (4180718) | 4180718..4180975 | + | 258 | WP_001054381.1 | YjhX family toxin | - |
| PQP85_RS20605 (4180980) | 4180980..4182611 | + | 1632 | WP_001575380.1 | class I SAM-dependent methyltransferase | - |
| PQP85_RS20610 (4183171) | 4183171..4183875 | + | 705 | WP_000532941.1 | hypothetical protein | VF |
| PQP85_RS20615 (4184355) | 4184355..4185230 | - | 876 | Protein_4035 | HNH endonuclease | - |
| PQP85_RS20620 (4185486) | 4185486..4186596 | - | 1111 | Protein_4036 | IS3 family transposase | - |
| PQP85_RS20625 (4186859) | 4186859..4187705 | - | 847 | Protein_4037 | YjiK family protein | - |
| PQP85_RS20630 (4187756) | 4187756..4187902 | - | 147 | WP_001141717.1 | hypothetical protein | - |
| PQP85_RS20635 (4187892) | 4187892..4188545 | - | 654 | WP_000178593.1 | DsbA family protein | - |
| PQP85_RS20640 (4188790) | 4188790..4189140 | - | 351 | WP_000135401.1 | hypothetical protein | VF |
| PQP85_RS20645 (4189125) | 4189125..4189334 | - | 210 | WP_000504711.1 | hypothetical protein | VF |
| PQP85_RS20650 (4189911) | 4189911..4190726 | + | 816 | WP_000914538.1 | AraC family transcriptional regulator | - |
| PQP85_RS20655 (4190760) | 4190760..4191206 | - | 447 | WP_001077813.1 | hypothetical protein | VF |
| PQP85_RS20660 (4191203) | 4191203..4193647 | - | 2445 | WP_000753927.1 | hypothetical protein | VF |
| PQP85_RS20665 (4193664) | 4193664..4194404 | - | 741 | WP_001575372.1 | hypothetical protein | VF |
| PQP85_RS20670 (4194526) | 4194526..4195056 | - | 531 | WP_000909460.1 | hypothetical protein | VF |
| PQP85_RS20675 (4195379) | 4195379..4196512 | + | 1134 | Protein_4047 | IS3 family transposase | - |
| PQP85_RS20680 (4196544) | 4196544..4196684 | - | 141 | Protein_4048 | Arm DNA-binding domain-containing protein | - |
| PQP85_RS20685 (4197090) | 4197090..4197398 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PQP85_RS20690 (4197401) | 4197401..4197640 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PQP85_RS20695 (4197749) | 4197749..4197997 | - | 249 | WP_000168389.1 | ribbon-helix-helix domain-containing protein | - |
| PQP85_RS20700 (4198188) | 4198188..4198619 | - | 432 | Protein_4052 | helix-turn-helix domain-containing protein | - |
| PQP85_RS20710 (4199376) | 4199376..4200395 | + | 1020 | WP_000152558.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PQP85_RS20715 (4200423) | 4200423..4200953 | - | 531 | WP_000896758.1 | gluconokinase | - |
| PQP85_RS20720 (4201170) | 4201170..4202201 | + | 1032 | WP_000453348.1 | L-idonate 5-dehydrogenase | - |
| PQP85_RS20725 (4202226) | 4202226..4202990 | + | 765 | WP_001061034.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|